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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180229032
OBCH01000001
95987
Bacteroidota
CAA
Leu
>WENV180229090
OBCH01000170
95987
Bacteroidota
CAA
Leu
>WENV180229156
OBCH01000860
95987
Bacteroidota
CAA
Leu
>WENV180229202
OBCH01003642
95987
Bacteroidota
CAA
Leu
>WENV180229273
OBCH01012708
339412
Bacteroidota
GGT
Thr
>WENV180229290
OBCH01018601
237796
Bacteroidota
CGT
Thr
>WENV180229045
OBCH01000020
97336
Bacteroidota
CAG
Leu
>WENV180229191
OBCH01003087
97336
Bacteroidota
CAG
Leu
>WENV180229062
OBCH01000042
413663
Bacteroidota
CTG
Gln
>WENV180229063
OBCH01000042
413663
Bacteroidota
CTG
Gln
>WENV180229066
OBCH01000056
136244
Bacteroidota
TAC
Val
>WENV180229109
OBCH01000295
136244
Bacteroidota
TAC
Val
>WENV180229110
OBCH01000295
136244
Bacteroidota
TAC
Val
>WENV180229179
OBCH01001810
136244
Bacteroidota
TAC
Val
>WENV180229264
OBCH01011188
136244
Bacteroidota
TAC
Val
>WENV180229170
OBCH01001527
237797
Bacteroidota
CCA
Trp
>WENV180229053
OBCH01000023
412479
Bacteroidota
TTG
Gln
>WENV180229137
OBCH01000714
412479
Bacteroidota
TTG
Gln
>WENV180229064
OBCH01000047
147147
Bacteroidota
GTG
His
>WENV180229065
OBCH01000047
147147
Bacteroidota
GTG
His
>WENV180229280
OBCH01014938
145504
Bacteroidota
TGT
Thr
>WENV180229201
OBCH01003587
193809
Bacteroidota
CAT
Met
>WENV180229051
OBCH01000023
37076
Bacteroidota
TAA
Leu
>WENV180229124
OBCH01000472
37076
Bacteroidota
TAA
Leu
>WENV180229049
OBCH01000021
344769
Bacteroidota
CTC
Glu
>WENV180229456
OBCH01090280
344769
Bacteroidota
CTC
Glu
>WENV180229457
OBCH01090325
344769
Bacteroidota
CTC
Glu
>WENV180229465
OBCH01092889
344769
Bacteroidota
CTC
Glu
>WENV180229040
OBCH01000011
147148
Bacteroidota
CAT
Met
>WENV180229268
OBCH01012114
415558
Bacteroidota
TTG
Gln
>WENV180229386
OBCH01044028
415558
Bacteroidota
TTG
Gln
>WENV180229347
OBCH01033715
175704
Bacteroidota
TGC
Ala
>WENV180229387
OBCH01044452
175704
Bacteroidota
TGC
Ala
>WENV180229388
OBCH01044695
175704
Bacteroidota
TGC
Ala
>WENV180229447
OBCH01083698
175704
Bacteroidota
TGC
Ala
>WENV180229454
OBCH01090070
175704
Bacteroidota
TGC
Ala
>WENV180229054
OBCH01000025
419272
Bacteroidota
CTG
Gln
>WENV180229113
OBCH01000322
419272
Bacteroidota
CTG
Gln
>WENV180229131
OBCH01000547
196394
Bacteroidota
GTC
Asp
>WENV180229269
OBCH01012191
196394
Bacteroidota
GTC
Asp
>WENV180229464
OBCH01092888
196394
Bacteroidota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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