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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180229838
OBCI01079942
144612
Bacillota
TCT
Arg
>WENV180229772
OBCI01041168
235098
Bacillota
GAC
Val
>WENV180229710
OBCI01018328
148348
Bacillota
GTC
Asp
>WENV180229809
OBCI01055130
144577
Bacillota
GAT
Ile
>WENV180229489
OBCI01000008
37071
Bacillota
TGA
Ser
>WENV180229496
OBCI01000014
59312
Bacillota
CAG
Leu
>WENV180229559
OBCI01000544
338147
Bacillota
CTC
Glu
>WENV180229487
OBCI01000007
338147
Bacillota
CTC
Glu
>WENV180229473
OBCI01000003
235114
Bacillota
TTT
Lys
>WENV180229479
OBCI01000004
235114
Bacillota
TTT
Lys
>WENV180229779
OBCI01045641
182792
Bacillota
GTC
Asp
>WENV180229497
OBCI01000015
44859
Bacillota
AAG
Leu
>WENV180229830
OBCI01070842
11034
Bacillota
GGA
Ser
>WENV180229711
OBCI01018328
239076
Bacillota
GAA
Phe
>WENV180229777
OBCI01044093
235079
Bacillota
GAA
Phe
>WENV180229808
OBCI01055130
235087
Bacillota
TGC
Ala
>WENV180229831
OBCI01072038
338149
Bacillota
CTC
Glu
>WENV180229784
OBCI01047359
245298
Bacillota
CGG
Pro
>WENV180229477
OBCI01000004
144610
Bacillota
GTG
His
>WENV180229783
OBCI01047359
411547
Bacillota
CTG
Gln
>WENV180229816
OBCI01059842
147684
Bacillota
ACG
Arg
>WENV180229780
OBCI01045641
235095
Bacillota
GGT
Thr
>WENV180229705
OBCI01017825
344183
Bacillota
CTG
Gln
>WENV180229483
OBCI01000005
235142
Bacillota
CTT
Lys
>WENV180229500
OBCI01000021
235142
Bacillota
CTT
Lys
>WENV180229801
OBCI01052120
235124
Bacillota
TGG
Pro
>WENV180229731
OBCI01025426
144583
Bacillota
ACG
Arg
>WENV180229746
OBCI01031673
347851
Bacillota
TTC
Glu
>WENV180229467
OBCI01000003
144652
Bacillota
GTC
Asp
>WENV180229538
OBCI01000245
144652
Bacillota
GTC
Asp
>WENV180229759
OBCI01034859
127572
Bacillota
ACG
Arg
>WENV180229812
OBCI01057012
235171
Bacillota
CCA
Trp
>WENV180229793
OBCI01051207
144621
Bacillota
GTT
Asn
>WENV180229472
OBCI01000003
235113
Bacillota
GAA
Phe
>WENV180229490
OBCI01000008
235113
Bacillota
GAA
Phe
>WENV180229748
OBCI01033789
58712
Bacillota
CAG
Leu
>WENV180229786
OBCI01047572
272992
Bacillota
CTT
Lys
>WENV180229745
OBCI01031673
239078
Bacillota
TTT
Lys
>WENV180229470
OBCI01000003
95563
Bacillota
GTA
Tyr
>WENV180229501
OBCI01000023
95563
Bacillota
GTA
Tyr
>WENV180229505
OBCI01000035
238945
Bacillota
GCC
Gly
>WENV180229506
OBCI01000035
238945
Bacillota
GCC
Gly
>WENV180229778
OBCI01044093
249259
Bacillota
GCC
Gly
>WENV180229727
OBCI01025085
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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