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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180230581
OBCL01060859
235098
Bacillota
GAC
Val
>WENV180230470
OBCL01019984
148239
Bacillota
TCT
Arg
>WENV180230537
OBCL01034984
44854
Bacillota
TGA
Ser
>WENV180230600
OBCL01079988
148348
Bacillota
GTC
Asp
>WENV180230586
OBCL01064172
144577
Bacillota
GAT
Ile
>WENV180230373
OBCL01007675
37071
Bacillota
TGA
Ser
>WENV180230368
OBCL01007256
59312
Bacillota
CAG
Leu
>WENV180230189
OBCL01000846
338147
Bacillota
CTC
Glu
>WENV180230220
OBCL01001413
338147
Bacillota
CTC
Glu
>WENV180230443
OBCL01015840
338147
Bacillota
CTC
Glu
>WENV180230638
OBCL01108012
235150
Bacillota
TGC
Ala
>WENV180230434
OBCL01013863
235114
Bacillota
TTT
Lys
>WENV180230302
OBCL01004646
175676
Bacillota
GAT
Ile
>WENV180230491
OBCL01023713
182792
Bacillota
GTC
Asp
>WENV180230593
OBCL01072729
44859
Bacillota
AAG
Leu
>WENV180230471
OBCL01019984
156937
Bacillota
GTG
His
>WENV180230603
OBCL01080617
235079
Bacillota
GAA
Phe
>WENV180230585
OBCL01064172
235087
Bacillota
TGC
Ala
>WENV180230637
OBCL01107818
338149
Bacillota
CTC
Glu
>WENV180230100
OBCL01000028
413152
Bacillota
TCC
Gly
>WENV180230528
OBCL01033585
162445
Bacillota
CAT
Met
>WENV180230222
OBCL01001472
235078
Bacillota
TAC
Val
>WENV180230629
OBCL01102201
153911
Bacillota
GAT
Ile
>WENV180230206
OBCL01001129
144610
Bacillota
GTG
His
>WENV180230225
OBCL01001472
240017
Bacillota
GCC
Gly
>WENV180230538
OBCL01034984
4624
Bacillota
GCT
Ser
>WENV180230575
OBCL01058786
411584
Bacillota
TCC
Gly
>WENV180230516
OBCL01030003
248683
Bacillota
TTT
Lys
>WENV180230492
OBCL01023713
235095
Bacillota
GGT
Thr
>WENV180230290
OBCL01003843
241471
Bacillota
TGC
Ala
>WENV180230549
OBCL01040686
411549
Bacillota
TTG
Gln
>WENV180230584
OBCL01063864
148188
Bacillota
CCG
Arg
>WENV180230607
OBCL01085250
147674
Bacillota
TCT
Arg
>WENV180230578
OBCL01060512
338129
Bacillota
TGT
Thr
>WENV180230570
OBCL01052761
144583
Bacillota
ACG
Arg
>WENV180230427
OBCL01012974
144652
Bacillota
GTC
Asp
>WENV180230301
OBCL01004646
247734
Bacillota
TGC
Ala
>WENV180230605
OBCL01080895
238974
Bacillota
GAA
Phe
>WENV180230369
OBCL01007434
235113
Bacillota
GAA
Phe
>WENV180230441
OBCL01015546
243098
Bacillota
GGT
Thr
>WENV180230545
OBCL01038957
58712
Bacillota
CAG
Leu
>WENV180230563
OBCL01048562
245296
Bacillota
CCC
Gly
>WENV180230642
OBCL01114304
272992
Bacillota
CTT
Lys
>WENV180230609
OBCL01085848
144594
Bacillota
CAC
Val
>WENV180230333
OBCL01005683
95563
Bacillota
GTA
Tyr
>WENV180230500
OBCL01026311
272488
Bacillota
GAA
Phe
>WENV180230180
OBCL01000712
238945
Bacillota
GCC
Gly
>WENV180230564
OBCL01049366
273862
Bacillota
TGC
Ala
>WENV180230481
OBCL01021619
338128
Bacillota
TTC
Glu
>WENV180230277
OBCL01003242
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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