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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180233726
OBCQ01000141
95987
Bacteroidota
CAA
Leu
>WENV180233766
OBCQ01000382
95987
Bacteroidota
CAA
Leu
>WENV180233811
OBCQ01000875
95987
Bacteroidota
CAA
Leu
>WENV180234578
OBCQ01191040
339412
Bacteroidota
GGT
Thr
>WENV180233691
OBCQ01000022
237796
Bacteroidota
CGT
Thr
>WENV180233887
OBCQ01002517
237796
Bacteroidota
CGT
Thr
>WENV180233951
OBCQ01004232
97336
Bacteroidota
CAG
Leu
>WENV180234147
OBCQ01018463
97336
Bacteroidota
CAG
Leu
>WENV180233736
OBCQ01000173
413663
Bacteroidota
CTG
Gln
>WENV180233775
OBCQ01000488
413663
Bacteroidota
CTG
Gln
>WENV180234179
OBCQ01022024
237797
Bacteroidota
CCA
Trp
>WENV180233920
OBCQ01003191
412479
Bacteroidota
TTG
Gln
>WENV180234592
OBCQ01193687
147147
Bacteroidota
GTG
His
>WENV180233780
OBCQ01000522
145504
Bacteroidota
TGT
Thr
>WENV180234553
OBCQ01168987
235203
Bacteroidota
TTT
Lys
>WENV180234256
OBCQ01032569
338132
Bacteroidota
GCA
Cys
>WENV180234005
OBCQ01006510
238810
Bacteroidota
CGG
Pro
>WENV180233750
OBCQ01000268
37076
Bacteroidota
TAA
Leu
>WENV180233789
OBCQ01000616
37076
Bacteroidota
TAA
Leu
>WENV180233804
OBCQ01000795
37076
Bacteroidota
TAA
Leu
>WENV180233903
OBCQ01002864
37076
Bacteroidota
TAA
Leu
>WENV180233905
OBCQ01002971
37076
Bacteroidota
TAA
Leu
>WENV180233769
OBCQ01000426
251266
Bacteroidota
CTT
Lys
>WENV180233774
OBCQ01000485
251266
Bacteroidota
CTT
Lys
>WENV180233886
OBCQ01002475
251266
Bacteroidota
CTT
Lys
>WENV180234122
OBCQ01015160
251266
Bacteroidota
CTT
Lys
>WENV180234167
OBCQ01020571
251266
Bacteroidota
CTT
Lys
>WENV180234335
OBCQ01048850
113604
Bacteroidota
>WENV180233798
OBCQ01000711
344769
Bacteroidota
CTC
Glu
>WENV180234052
OBCQ01010585
344769
Bacteroidota
CTC
Glu
>WENV180234287
OBCQ01036589
344769
Bacteroidota
CTC
Glu
>WENV180233705
OBCQ01000066
415558
Bacteroidota
TTG
Gln
>WENV180233747
OBCQ01000259
415558
Bacteroidota
TTG
Gln
>WENV180234155
OBCQ01019562
353927
Bacteroidota
TTC
Glu
>WENV180234433
OBCQ01086953
353927
Bacteroidota
TTC
Glu
>WENV180234056
OBCQ01010872
146764
Bacteroidota
GTC
Asp
>WENV180234057
OBCQ01010872
146764
Bacteroidota
GTC
Asp
>WENV180234058
OBCQ01010872
146764
Bacteroidota
GTC
Asp
>WENV180234148
OBCQ01018463
59498
Bacteroidota
GAG
Leu
>WENV180234375
OBCQ01061805
127023
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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