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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180274750
OBHE01031321
202812
Bacillota
CAT
Met
>WENV180274682
OBHE01009378
59312
Bacillota
CAG
Leu
>WENV180274854
OBHE01079768
198770
Bacillota
GTC
Asp
>WENV180274809
OBHE01054856
429429
Bacillota
CCA
Trp
>WENV180274777
OBHE01041483
173314
Bacillota
GAT
Ile
>WENV180274786
OBHE01044219
169968
Bacillota
CAT
Met
>WENV180274785
OBHE01044219
100326
Bacillota
GTA
Tyr
>WENV180274648
OBHE01004102
300148
Bacillota
TAC
Val
>WENV180274814
OBHE01056565
154748
Bacillota
GTC
Asp
>WENV180274713
OBHE01020310
245386
Bacillota
CCA
Trp
>WENV180274698
OBHE01015821
411739
Bacillota
TCC
Gly
>WENV180274649
OBHE01004102
157838
Bacillota
GTC
Asp
>WENV180274678
OBHE01007693
144583
Bacillota
ACG
Arg
>WENV180274776
OBHE01041483
299139
Bacillota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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