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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180280427
OBHY01009362
95633
Gammaproteobacteria
GTA
Tyr
>WENV180280341
OBHY01000034
161961
Gammaproteobacteria
ACG
Arg
>WENV180280342
OBHY01000034
161961
Gammaproteobacteria
ACG
Arg
>WENV180280343
OBHY01000034
161961
Gammaproteobacteria
ACG
Arg
>WENV180280360
OBHY01000124
44864
Gammaproteobacteria
TGA
Ser
>WENV180280371
OBHY01000258
144739
Gammaproteobacteria
GGG
Pro
>WENV180280378
OBHY01000362
161963
Gammaproteobacteria
GAC
Val
>WENV180280363
OBHY01000166
24181
Gammaproteobacteria
CGA
Ser
>WENV180280356
OBHY01000117
95576
Gammaproteobacteria
TAG
Leu
>WENV180280339
OBHY01000033
144732
Gammaproteobacteria
TCT
Arg
>WENV180280355
OBHY01000117
147054
Gammaproteobacteria
CAT
Met
>WENV180280358
OBHY01000117
147054
Gammaproteobacteria
CAT
Met
>WENV180280411
OBHY01003351
145335
Gammaproteobacteria
GGG
Pro
>WENV180280345
OBHY01000037
237462
Gammaproteobacteria
GTG
His
>WENV180280429
OBHY01011131
239650
Gammaproteobacteria
TGT
Thr
>WENV180280382
OBHY01000372
254172
Gammaproteobacteria
GGT
Thr
>WENV180280351
OBHY01000099
95575
Gammaproteobacteria
>WENV180280368
OBHY01000212
80618
Gammaproteobacteria
TAA
Leu
>WENV180280437
OBHY01021931
58859
Gammaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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