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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180288540
OBIM01000012
235097
Bacteroidota
TTT
Lys
>WENV180288870
OBIM01008622
267954
Bacteroidota
GCC
Gly
>WENV180288670
OBIM01000673
338155
Bacteroidota
CTC
Glu
>WENV180288839
OBIM01005254
153993
Bacteroidota
GAT
Ile
>WENV180289092
OBIM01069360
415410
Bacteroidota
TTG
Gln
>WENV180288618
OBIM01000302
126641
Bacteroidota
TAC
Val
>WENV180288619
OBIM01000302
126641
Bacteroidota
TAC
Val
>WENV180288696
OBIM01001001
338132
Bacteroidota
GCA
Cys
>WENV180288997
OBIM01031833
338132
Bacteroidota
GCA
Cys
>WENV180288721
OBIM01001294
301449
Bacteroidota
CGG
Pro
>WENV180289088
OBIM01069305
301449
Bacteroidota
CGG
Pro
>WENV180288748
OBIM01001578
144933
Bacteroidota
TCT
Arg
>WENV180288682
OBIM01000869
144596
Bacteroidota
GGC
Ala
>WENV180289084
OBIM01069240
80607
Bacteroidota
GTA
Tyr
>WENV180288890
OBIM01010454
16999
Bacteroidota
GGA
Ser
>WENV180288559
OBIM01000029
52358
Bacteroidota
TGA
Ser
>WENV180288561
OBIM01000029
52358
Bacteroidota
TGA
Ser
>WENV180288674
OBIM01000752
52358
Bacteroidota
TGA
Ser
>WENV180288755
OBIM01001647
52358
Bacteroidota
TGA
Ser
>WENV180288848
OBIM01006566
151121
Bacteroidota
CAT
Met
>WENV180288781
OBIM01002232
338165
Bacteroidota
GGT
Thr
>WENV180288678
OBIM01000792
132360
Bacteroidota
GGG
Pro
>WENV180288569
OBIM01000063
425638
Bacteroidota
CTG
Gln
>WENV180288804
OBIM01002883
425638
Bacteroidota
CTG
Gln
>WENV180288860
OBIM01007524
425638
Bacteroidota
CTG
Gln
>WENV180288554
OBIM01000020
239647
Bacteroidota
TTT
Lys
>WENV180288669
OBIM01000673
23696
Bacteroidota
GCT
Ser
>WENV180288973
OBIM01023443
338125
Bacteroidota
CCT
Arg
>WENV180288555
OBIM01000022
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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