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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180312214
OBJX01000036
338155
Bacteroidota
CTC
Glu
>WENV180312141
OBJX01000001
95618
Bacteroidota
TAG
Leu
>WENV180312144
OBJX01000001
411543
Bacteroidota
CTG
Gln
>WENV180312259
OBJX01000070
235182
Bacteroidota
>WENV180312215
OBJX01000036
272983
Bacteroidota
CGT
Thr
>WENV180312211
OBJX01000034
338132
Bacteroidota
GCA
Cys
>WENV180312201
OBJX01000024
144688
Bacteroidota
CAT
Met
>WENV180312151
OBJX01000003
181746
Bacteroidota
GGC
Ala
>WENV180312164
OBJX01000006
144933
Bacteroidota
TCT
Arg
>WENV180312282
OBJX01000106
235207
Bacteroidota
CAT
Met
>WENV180312297
OBJX01000155
80607
Bacteroidota
GTA
Tyr
>WENV180312225
OBJX01000049
338165
Bacteroidota
GGT
Thr
>WENV180312210
OBJX01000034
50727
Bacteroidota
TGA
Ser
>WENV180312279
OBJX01000094
50727
Bacteroidota
TGA
Ser
>WENV180312136
OBJX01000001
132360
Bacteroidota
GGG
Pro
>WENV180312169
OBJX01000009
19317
Bacteroidota
GGA
Ser
>WENV180312289
OBJX01000123
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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