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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180331076
OBKW01010647
155958
Bacillota
GAT
Ile
>WENV180331067
OBKW01009039
155113
Bacillota
CGG
Pro
>WENV180331191
OBKW01051887
144612
Bacillota
TCT
Arg
>WENV180330961
OBKW01000983
235098
Bacillota
GAC
Val
>WENV180331063
OBKW01008497
235098
Bacillota
GAC
Val
>WENV180331042
OBKW01006184
338152
Bacillota
TTC
Glu
>WENV180330978
OBKW01001551
44854
Bacillota
TGA
Ser
>WENV180331264
OBKW01130832
144577
Bacillota
GAT
Ile
>WENV180330938
OBKW01000385
59312
Bacillota
CAG
Leu
>WENV180330995
OBKW01002169
338147
Bacillota
CTC
Glu
>WENV180331187
OBKW01050422
114359
Bacillota
TAG
Leu
>WENV180331217
OBKW01074984
144668
Bacillota
GTC
Asp
>WENV180331296
OBKW01180065
235091
Bacillota
CTT
Lys
>WENV180330937
OBKW01000385
44859
Bacillota
AAG
Leu
>WENV180331081
OBKW01011654
11034
Bacillota
GGA
Ser
>WENV180331104
OBKW01017054
235079
Bacillota
GAA
Phe
>WENV180331064
OBKW01008687
235087
Bacillota
TGC
Ala
>WENV180330990
OBKW01001894
338149
Bacillota
CTC
Glu
>WENV180331074
OBKW01010539
245298
Bacillota
CGG
Pro
>WENV180331160
OBKW01036845
37269
Bacillota
TGA
Ser
>WENV180331058
OBKW01008220
413152
Bacillota
TCC
Gly
>WENV180331073
OBKW01010539
411547
Bacillota
CTG
Gln
>WENV180330979
OBKW01001551
4624
Bacillota
GCT
Ser
>WENV180331038
OBKW01005946
235095
Bacillota
GGT
Thr
>WENV180331069
OBKW01009616
411549
Bacillota
TTG
Gln
>WENV180331088
OBKW01012754
235142
Bacillota
CTT
Lys
>WENV180331272
OBKW01151885
148188
Bacillota
CCG
Arg
>WENV180331022
OBKW01004255
235124
Bacillota
TGG
Pro
>WENV180331091
OBKW01013240
338129
Bacillota
TGT
Thr
>WENV180331056
OBKW01008100
144583
Bacillota
ACG
Arg
>WENV180331099
OBKW01016806
144583
Bacillota
ACG
Arg
>WENV180331222
OBKW01079436
144583
Bacillota
ACG
Arg
>WENV180331036
OBKW01005946
235171
Bacillota
CCA
Trp
>WENV180331108
OBKW01019430
235171
Bacillota
CCA
Trp
>WENV180330991
OBKW01001894
144621
Bacillota
GTT
Asn
>WENV180331110
OBKW01019692
58712
Bacillota
CAG
Leu
>WENV180331046
OBKW01006373
245296
Bacillota
CCC
Gly
>WENV180330996
OBKW01002174
144594
Bacillota
CAC
Val
>WENV180331084
OBKW01012303
95563
Bacillota
GTA
Tyr
>WENV180331285
OBKW01171822
146770
Bacillota
TTC
Glu
>WENV180331033
OBKW01005782
249259
Bacillota
GCC
Gly
>WENV180331141
OBKW01030593
338128
Bacillota
TTC
Glu
>WENV180331270
OBKW01147496
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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