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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
176 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180338939
OBLI01001525
95987
Bacteroidota
CAA
Leu
>WENV180339377
OBLI01003775
95987
Bacteroidota
CAA
Leu
>WENV180339613
OBLI01006207
95987
Bacteroidota
CAA
Leu
>WENV180340678
OBLI01036592
95987
Bacteroidota
CAA
Leu
>WENV180340710
OBLI01039652
95987
Bacteroidota
CAA
Leu
>WENV180341574
OBLI01166476
95987
Bacteroidota
CAA
Leu
>WENV180338290
OBLI01000163
339412
Bacteroidota
GGT
Thr
>WENV180341030
OBLI01068372
339412
Bacteroidota
GGT
Thr
>WENV180341485
OBLI01137312
339412
Bacteroidota
GGT
Thr
>WENV180342120
OBLI01453809
339412
Bacteroidota
GGT
Thr
>WENV180338328
OBLI01000210
267954
Bacteroidota
GCC
Gly
>WENV180339802
OBLI01008375
267954
Bacteroidota
GCC
Gly
>WENV180339803
OBLI01008375
267954
Bacteroidota
GCC
Gly
>WENV180342123
OBLI01463196
267954
Bacteroidota
GCC
Gly
>WENV180341877
OBLI01257900
146761
Bacteroidota
GAT
Ile
>WENV180338393
OBLI01000289
237796
Bacteroidota
CGT
Thr
>WENV180338447
OBLI01000358
237796
Bacteroidota
CGT
Thr
>WENV180339807
OBLI01008437
144657
Bacteroidota
CGG
Pro
>WENV180339159
OBLI01002519
97336
Bacteroidota
CAG
Leu
>WENV180339243
OBLI01003100
97336
Bacteroidota
CAG
Leu
>WENV180338670
OBLI01000783
339341
Bacteroidota
GGT
Thr
>WENV180339116
OBLI01002290
343138
Bacteroidota
CCT
Arg
>WENV180338370
OBLI01000262
338486
Bacteroidota
CAT
Met
>WENV180338490
OBLI01000457
338486
Bacteroidota
CAT
Met
>WENV180338728
OBLI01000946
413663
Bacteroidota
CTG
Gln
>WENV180338729
OBLI01000946
413663
Bacteroidota
CTG
Gln
>WENV180338840
OBLI01001178
413663
Bacteroidota
CTG
Gln
>WENV180338841
OBLI01001178
413663
Bacteroidota
CTG
Gln
>WENV180339051
OBLI01001982
413663
Bacteroidota
CTG
Gln
>WENV180339052
OBLI01001982
413663
Bacteroidota
CTG
Gln
>WENV180339263
OBLI01003213
413663
Bacteroidota
CTG
Gln
>WENV180339399
OBLI01003953
413663
Bacteroidota
CTG
Gln
>WENV180338407
OBLI01000301
136244
Bacteroidota
TAC
Val
>WENV180338476
OBLI01000428
136244
Bacteroidota
TAC
Val
>WENV180338477
OBLI01000428
136244
Bacteroidota
TAC
Val
>WENV180338566
OBLI01000621
136244
Bacteroidota
TAC
Val
>WENV180338567
OBLI01000621
136244
Bacteroidota
TAC
Val
>WENV180338650
OBLI01000753
136244
Bacteroidota
TAC
Val
>WENV180338881
OBLI01001296
136244
Bacteroidota
TAC
Val
>WENV180338887
OBLI01001314
136244
Bacteroidota
TAC
Val
>WENV180338888
OBLI01001314
136244
Bacteroidota
TAC
Val
>WENV180339031
OBLI01001848
136244
Bacteroidota
TAC
Val
>WENV180339114
OBLI01002267
136244
Bacteroidota
TAC
Val
>WENV180339255
OBLI01003156
136244
Bacteroidota
TAC
Val
>WENV180339494
OBLI01004996
136244
Bacteroidota
TAC
Val
>WENV180339621
OBLI01006327
136244
Bacteroidota
TAC
Val
>WENV180339831
OBLI01008807
136244
Bacteroidota
TAC
Val
>WENV180339967
OBLI01010583
136244
Bacteroidota
TAC
Val
>WENV180340042
OBLI01012667
136244
Bacteroidota
TAC
Val
>WENV180340969
OBLI01060879
136244
Bacteroidota
TAC
Val
>WENV180340999
OBLI01064167
136244
Bacteroidota
TAC
Val
>WENV180342109
OBLI01450482
237797
Bacteroidota
CCA
Trp
>WENV180339599
OBLI01005988
59689
Bacteroidota
CAG
Leu
>WENV180338516
OBLI01000487
20893
Bacteroidota
GGA
Ser
>WENV180338804
OBLI01001068
144695
Bacteroidota
CAT
Met
>WENV180339072
OBLI01002039
144695
Bacteroidota
CAT
Met
>WENV180339201
OBLI01002758
144695
Bacteroidota
CAT
Met
>WENV180339259
OBLI01003187
144695
Bacteroidota
CAT
Met
>WENV180339264
OBLI01003216
144695
Bacteroidota
CAT
Met
>WENV180338901
OBLI01001341
412479
Bacteroidota
TTG
Gln
>WENV180339084
OBLI01002087
412479
Bacteroidota
TTG
Gln
>WENV180340549
OBLI01029427
128251
Bacteroidota
TGG
Pro
>WENV180338431
OBLI01000332
147147
Bacteroidota
GTG
His
>WENV180338432
OBLI01000332
147147
Bacteroidota
GTG
His
>WENV180338549
OBLI01000588
147147
Bacteroidota
GTG
His
>WENV180338723
OBLI01000929
147147
Bacteroidota
GTG
His
>WENV180338771
OBLI01001040
147147
Bacteroidota
GTG
His
>WENV180338772
OBLI01001040
147147
Bacteroidota
GTG
His
>WENV180339404
OBLI01004045
147147
Bacteroidota
GTG
His
>WENV180340161
OBLI01015630
147147
Bacteroidota
GTG
His
>WENV180339093
OBLI01002142
155123
Bacteroidota
GTT
Asn
>WENV180339094
OBLI01002142
155123
Bacteroidota
GTT
Asn
>WENV180339389
OBLI01003887
155123
Bacteroidota
GTT
Asn
>WENV180339439
OBLI01004439
155123
Bacteroidota
GTT
Asn
>WENV180339588
OBLI01005933
155123
Bacteroidota
GTT
Asn
>WENV180340177
OBLI01016194
155123
Bacteroidota
GTT
Asn
>WENV180340373
OBLI01021862
155123
Bacteroidota
GTT
Asn
>WENV180342140
OBLI01468403
155123
Bacteroidota
GTT
Asn
>WENV180338411
OBLI01000305
145504
Bacteroidota
TGT
Thr
>WENV180338866
OBLI01001243
235203
Bacteroidota
TTT
Lys
>WENV180338656
OBLI01000768
238121
Bacteroidota
CTT
Lys
>WENV180338657
OBLI01000768
238121
Bacteroidota
CTT
Lys
>WENV180338519
OBLI01000489
338132
Bacteroidota
GCA
Cys
>WENV180338520
OBLI01000489
338132
Bacteroidota
GCA
Cys
>WENV180338699
OBLI01000856
104003
Bacteroidota
TAG
Leu
>WENV180338148
OBLI01000057
238810
Bacteroidota
CGG
Pro
>WENV180340043
OBLI01012681
238810
Bacteroidota
CGG
Pro
>WENV180339125
OBLI01002376
193809
Bacteroidota
CAT
Met
>WENV180339277
OBLI01003291
193809
Bacteroidota
CAT
Met
>WENV180338450
OBLI01000365
37076
Bacteroidota
TAA
Leu
>WENV180338531
OBLI01000518
37076
Bacteroidota
TAA
Leu
>WENV180338677
OBLI01000802
37076
Bacteroidota
TAA
Leu
>WENV180339468
OBLI01004765
37076
Bacteroidota
TAA
Leu
>WENV180339637
OBLI01006489
37076
Bacteroidota
TAA
Leu
>WENV180339980
OBLI01010961
37076
Bacteroidota
TAA
Leu
>WENV180340451
OBLI01024777
37076
Bacteroidota
TAA
Leu
>WENV180338595
OBLI01000667
301449
Bacteroidota
CGG
Pro
>WENV180338924
OBLI01001445
251266
Bacteroidota
CTT
Lys
>WENV180339736
OBLI01007512
251266
Bacteroidota
CTT
Lys
>WENV180340026
OBLI01012229
251266
Bacteroidota
CTT
Lys
>WENV180340351
OBLI01021316
53439
Bacteroidota
TGA
Ser
>WENV180338410
OBLI01000304
136207
Bacteroidota
TAC
Val
>WENV180338818
OBLI01001110
136207
Bacteroidota
TAC
Val
>WENV180338868
OBLI01001245
136207
Bacteroidota
TAC
Val
>WENV180339139
OBLI01002433
136207
Bacteroidota
TAC
Val
>WENV180339140
OBLI01002433
136207
Bacteroidota
TAC
Val
>WENV180339141
OBLI01002433
136207
Bacteroidota
TAC
Val
>WENV180339152
OBLI01002508
136207
Bacteroidota
TAC
Val
>WENV180339414
OBLI01004138
136207
Bacteroidota
TAC
Val
>WENV180339779
OBLI01007996
136207
Bacteroidota
TAC
Val
>WENV180338834
OBLI01001151
171336
Bacteroidota
GGC
Ala
>WENV180339844
OBLI01009058
171336
Bacteroidota
GGC
Ala
>WENV180341669
OBLI01192424
171336
Bacteroidota
GGC
Ala
>WENV180342092
OBLI01448404
171336
Bacteroidota
GGC
Ala
>WENV180338671
OBLI01000783
235180
Bacteroidota
CCA
Trp
>WENV180338654
OBLI01000767
344769
Bacteroidota
CTC
Glu
>WENV180338712
OBLI01000890
344769
Bacteroidota
CTC
Glu
>WENV180339014
OBLI01001792
344769
Bacteroidota
CTC
Glu
>WENV180339016
OBLI01001800
344769
Bacteroidota
CTC
Glu
>WENV180339175
OBLI01002606
344769
Bacteroidota
CTC
Glu
>WENV180339176
OBLI01002606
344769
Bacteroidota
CTC
Glu
>WENV180339813
OBLI01008613
344769
Bacteroidota
CTC
Glu
>WENV180339814
OBLI01008613
344769
Bacteroidota
CTC
Glu
>WENV180340074
OBLI01013494
344769
Bacteroidota
CTC
Glu
>WENV180340536
OBLI01028784
344769
Bacteroidota
CTC
Glu
>WENV180340610
OBLI01032759
344769
Bacteroidota
CTC
Glu
>WENV180341912
OBLI01276845
344769
Bacteroidota
CTC
Glu
>WENV180341974
OBLI01321766
344769
Bacteroidota
CTC
Glu
>WENV180341991
OBLI01336436
344769
Bacteroidota
CTC
Glu
>WENV180342129
OBLI01466572
344769
Bacteroidota
CTC
Glu
>WENV180342142
OBLI01469107
344769
Bacteroidota
CTC
Glu
>WENV180339000
OBLI01001702
147148
Bacteroidota
CAT
Met
>WENV180339229
OBLI01002991
147148
Bacteroidota
CAT
Met
>WENV180338500
OBLI01000475
415558
Bacteroidota
TTG
Gln
>WENV180338990
OBLI01001644
415558
Bacteroidota
TTG
Gln
>WENV180339752
OBLI01007746
415558
Bacteroidota
TTG
Gln
>WENV180338518
OBLI01000487
127277
Bacteroidota
TAC
Val
>WENV180338725
OBLI01000939
338164
Bacteroidota
TTC
Glu
>WENV180338601
OBLI01000677
151121
Bacteroidota
CAT
Met
>WENV180338269
OBLI01000145
147439
Bacteroidota
TCT
Arg
>WENV180338879
OBLI01001284
238606
Bacteroidota
CGG
Pro
>WENV180342090
OBLI01443104
95986
Bacteroidota
GTA
Tyr
>WENV180338556
OBLI01000596
196394
Bacteroidota
GTC
Asp
>WENV180339153
OBLI01002511
196394
Bacteroidota
GTC
Asp
>WENV180339154
OBLI01002511
196394
Bacteroidota
GTC
Asp
>WENV180339155
OBLI01002513
196394
Bacteroidota
GTC
Asp
>WENV180339156
OBLI01002513
196394
Bacteroidota
GTC
Asp
>WENV180339232
OBLI01003000
196394
Bacteroidota
GTC
Asp
>WENV180339636
OBLI01006467
196394
Bacteroidota
GTC
Asp
>WENV180339650
OBLI01006696
196394
Bacteroidota
GTC
Asp
>WENV180339657
OBLI01006784
196394
Bacteroidota
GTC
Asp
>WENV180339840
OBLI01008942
196394
Bacteroidota
GTC
Asp
>WENV180340727
OBLI01040824
196394
Bacteroidota
GTC
Asp
>WENV180342139
OBLI01468385
196394
Bacteroidota
GTC
Asp
>WENV180339122
OBLI01002345
132360
Bacteroidota
GGG
Pro
>WENV180340416
OBLI01023507
132360
Bacteroidota
GGG
Pro
>WENV180340498
OBLI01026975
132360
Bacteroidota
GGG
Pro
>WENV180341679
OBLI01194633
353927
Bacteroidota
TTC
Glu
>WENV180341773
OBLI01223071
353927
Bacteroidota
TTC
Glu
>WENV180341911
OBLI01275842
353927
Bacteroidota
TTC
Glu
>WENV180338455
OBLI01000386
146762
Bacteroidota
TGG
Pro
>WENV180338543
OBLI01000551
146762
Bacteroidota
TGG
Pro
>WENV180339607
OBLI01006095
146762
Bacteroidota
TGG
Pro
>WENV180339209
OBLI01002828
412236
Bacteroidota
CCC
Gly
>WENV180339317
OBLI01003478
412236
Bacteroidota
CCC
Gly
>WENV180338372
OBLI01000264
59498
Bacteroidota
GAG
Leu
>WENV180338704
OBLI01000870
59498
Bacteroidota
GAG
Leu
>WENV180338956
OBLI01001580
59498
Bacteroidota
GAG
Leu
>WENV180339065
OBLI01002023
59498
Bacteroidota
GAG
Leu
>WENV180339070
OBLI01002032
59498
Bacteroidota
GAG
Leu
>WENV180339971
OBLI01010738
59498
Bacteroidota
GAG
Leu
>WENV180340081
OBLI01013698
59498
Bacteroidota
GAG
Leu
>WENV180342126
OBLI01464988
59498
Bacteroidota
GAG
Leu
>WENV180338715
OBLI01000906
151960
Bacteroidota
GGC
Ala
>WENV180339596
OBLI01005988
235129
Bacteroidota
GCC
Gly
>WENV180339598
OBLI01005988
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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