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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180368913
OBOG01006867
30581
Alphaproteobacteria
GGA
Ser
>WENV180369308
OBOG01072986
113700
Alphaproteobacteria
>WENV180368922
OBOG01007297
256175
Alphaproteobacteria
TGT
Thr
>WENV180369027
OBOG01016689
435528
Alphaproteobacteria
GCA
Cys
>WENV180368953
OBOG01009404
338282
Alphaproteobacteria
GTT
Asn
>WENV180369082
OBOG01023516
339722
Alphaproteobacteria
TTG
Gln
>WENV180369449
OBOG01116603
339722
Alphaproteobacteria
TTG
Gln
>WENV180368834
OBOG01002065
147334
Alphaproteobacteria
CAT
Met
>WENV180369071
OBOG01021162
341164
Alphaproteobacteria
GCC
Gly
>WENV180369614
OBOG01197150
242540
Alphaproteobacteria
TGC
Ala
>WENV180368895
OBOG01005477
359842
Alphaproteobacteria
GAC
Val
>WENV180368978
OBOG01012001
241518
Alphaproteobacteria
CCA
Trp
>WENV180369505
OBOG01142517
338760
Alphaproteobacteria
GAA
Phe
>WENV180368975
OBOG01011665
339606
Alphaproteobacteria
>WENV180368907
OBOG01006672
412424
Alphaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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