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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180390903
OBPL01083878
267922
Alphaproteobacteria
CCA
Trp
>WENV180390513
OBPL01000020
241021
Alphaproteobacteria
GGC
Ala
>WENV180390504
OBPL01000005
113700
Alphaproteobacteria
>WENV180390656
OBPL01006429
113700
Alphaproteobacteria
>WENV180390522
OBPL01000053
338282
Alphaproteobacteria
GTT
Asn
>WENV180390516
OBPL01000022
147083
Alphaproteobacteria
GGG
Pro
>WENV180390735
OBPL01016092
339846
Alphaproteobacteria
GAC
Val
>WENV180390528
OBPL01000128
147879
Alphaproteobacteria
TGG
Pro
>WENV180390834
OBPL01042560
339722
Alphaproteobacteria
TTG
Gln
>WENV180390830
OBPL01040761
147334
Alphaproteobacteria
CAT
Met
>WENV180390574
OBPL01001110
113716
Alphaproteobacteria
CAA
Leu
>WENV180390518
OBPL01000029
252148
Alphaproteobacteria
TGT
Thr
>WENV180390521
OBPL01000045
340106
Alphaproteobacteria
GCC
Gly
>WENV180390608
OBPL01002664
341164
Alphaproteobacteria
GCC
Gly
>WENV180390907
OBPL01092864
348781
Alphaproteobacteria
GAA
Phe
>WENV180390831
OBPL01041276
344517
Alphaproteobacteria
GTT
Asn
>WENV180390549
OBPL01000565
147283
Alphaproteobacteria
GTG
His
>WENV180390577
OBPL01001193
154227
Alphaproteobacteria
CAT
Met
>WENV180390509
OBPL01000013
412424
Alphaproteobacteria
TCC
Gly
>WENV180390593
OBPL01001893
150356
Alphaproteobacteria
GTC
Asp
>WENV180390505
OBPL01000005
236256
Alphaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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