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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180404209
OBRV01001615
361659
Bacillota
GCC
Gly
>WENV180404240
OBRV01007441
97943
Bacillota
GTA
Tyr
>WENV180404208
OBRV01001615
114359
Bacillota
TAG
Leu
>WENV180404194
OBRV01000975
186380
Bacillota
GTC
Asp
>WENV180404198
OBRV01000975
186380
Bacillota
GTC
Asp
>WENV180404215
OBRV01002343
338550
Bacillota
>WENV180404193
OBRV01000975
263765
Bacillota
TAC
Val
>WENV180404197
OBRV01000975
263765
Bacillota
TAC
Val
>WENV180404210
OBRV01001653
198159
Bacillota
CAT
Met
>WENV180404186
OBRV01000701
411739
Bacillota
TCC
Gly
>WENV180404234
OBRV01004978
235638
Bacillota
GAA
Phe
>WENV180404207
OBRV01001615
237963
Bacillota
TTT
Lys
>WENV180404204
OBRV01001615
201667
Bacillota
TCT
Arg
>WENV180404205
OBRV01001615
279635
Bacillota
GTG
His
>WENV180404227
OBRV01003079
238747
Bacillota
GTG
His
>WENV180404192
OBRV01000975
353527
Bacillota
TTC
Glu
>WENV180404196
OBRV01000975
353527
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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