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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180406322
OBUO01002417
235146
Actinomycetota
CGT
Thr
>WENV180406336
OBUO01005683
273786
Actinomycetota
CGT
Thr
>WENV180406327
OBUO01002623
158720
Actinomycetota
ACG
Arg
>WENV180406331
OBUO01003775
411601
Actinomycetota
CCC
Gly
>WENV180406295
OBUO01000970
235174
Actinomycetota
TGC
Ala
>WENV180406323
OBUO01002469
235101
Actinomycetota
TTT
Lys
>WENV180406319
OBUO01002303
356045
Actinomycetota
GAC
Val
>WENV180406320
OBUO01002303
235199
Actinomycetota
CAC
Val
>WENV180406329
OBUO01003210
254857
Actinomycetota
CCG
Arg
>WENV180406318
OBUO01002150
144700
Actinomycetota
CAT
Met
>WENV180406314
OBUO01002057
338148
Actinomycetota
CTG
Gln
>WENV180406339
OBUO01005795
235148
Actinomycetota
GTT
Asn
>WENV180406317
OBUO01002074
144595
Actinomycetota
CAA
Leu
>WENV180406313
OBUO01002049
47164
Actinomycetota
GGA
Ser
>WENV180406277
OBUO01000643
183544
Actinomycetota
CAT
Met
>WENV180406337
OBUO01005687
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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