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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
67 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180413249
OBVB01000360
235097
Bacteroidota
TTT
Lys
>WENV180413105
OBVB01000143
144657
Bacteroidota
CGG
Pro
>WENV180413015
OBVB01000067
338155
Bacteroidota
CTC
Glu
>WENV180413083
OBVB01000130
338155
Bacteroidota
CTC
Glu
>WENV180413059
OBVB01000106
150845
Bacteroidota
GTC
Asp
>WENV180412894
OBVB01000011
343138
Bacteroidota
CCT
Arg
>WENV180412872
OBVB01000003
58715
Bacteroidota
GAG
Leu
>WENV180413008
OBVB01000062
46165
Bacteroidota
TGA
Ser
>WENV180412881
OBVB01000005
95618
Bacteroidota
TAG
Leu
>WENV180413253
OBVB01000372
338486
Bacteroidota
CAT
Met
>WENV180413280
OBVB01000426
338486
Bacteroidota
CAT
Met
>WENV180412868
OBVB01000002
48053
Bacteroidota
TGA
Ser
>WENV180412916
OBVB01000027
48053
Bacteroidota
TGA
Ser
>WENV180412917
OBVB01000027
48053
Bacteroidota
TGA
Ser
>WENV180412969
OBVB01000042
48053
Bacteroidota
TGA
Ser
>WENV180413133
OBVB01000167
48053
Bacteroidota
TGA
Ser
>WENV180413177
OBVB01000225
48053
Bacteroidota
TGA
Ser
>WENV180412930
OBVB01000033
415410
Bacteroidota
TTG
Gln
>WENV180412901
OBVB01000015
411543
Bacteroidota
CTG
Gln
>WENV180412871
OBVB01000003
59689
Bacteroidota
CAG
Leu
>WENV180413150
OBVB01000187
59689
Bacteroidota
CAG
Leu
>WENV180413027
OBVB01000077
235182
Bacteroidota
>WENV180413035
OBVB01000087
235203
Bacteroidota
TTT
Lys
>WENV180413178
OBVB01000226
235203
Bacteroidota
TTT
Lys
>WENV180413005
OBVB01000062
238121
Bacteroidota
CTT
Lys
>WENV180413006
OBVB01000062
238121
Bacteroidota
CTT
Lys
>WENV180412864
OBVB01000001
126641
Bacteroidota
TAC
Val
>WENV180412865
OBVB01000001
126641
Bacteroidota
TAC
Val
>WENV180412982
OBVB01000051
338132
Bacteroidota
GCA
Cys
>WENV180413137
OBVB01000170
338132
Bacteroidota
GCA
Cys
>WENV180413395
OBVB01000823
338132
Bacteroidota
GCA
Cys
>WENV180413132
OBVB01000166
144688
Bacteroidota
CAT
Met
>WENV180413007
OBVB01000062
45423
Bacteroidota
TGA
Ser
>WENV180412909
OBVB01000021
58714
Bacteroidota
CAA
Leu
>WENV180412915
OBVB01000025
144933
Bacteroidota
TCT
Arg
>WENV180412999
OBVB01000060
144933
Bacteroidota
TCT
Arg
>WENV180413256
OBVB01000384
235207
Bacteroidota
CAT
Met
>WENV180413270
OBVB01000412
144659
Bacteroidota
GTG
His
>WENV180413271
OBVB01000412
144659
Bacteroidota
GTG
His
>WENV180413038
OBVB01000089
235180
Bacteroidota
CCA
Trp
>WENV180413106
OBVB01000143
235180
Bacteroidota
CCA
Trp
>WENV180412933
OBVB01000035
144596
Bacteroidota
GGC
Ala
>WENV180412910
OBVB01000023
80607
Bacteroidota
GTA
Tyr
>WENV180412925
OBVB01000029
80607
Bacteroidota
GTA
Tyr
>WENV180413142
OBVB01000173
80607
Bacteroidota
GTA
Tyr
>WENV180413351
OBVB01000671
80607
Bacteroidota
GTA
Tyr
>WENV180412988
OBVB01000053
80614
Bacteroidota
>WENV180413037
OBVB01000087
80614
Bacteroidota
>WENV180413298
OBVB01000478
80614
Bacteroidota
>WENV180412891
OBVB01000011
338164
Bacteroidota
TTC
Glu
>WENV180412892
OBVB01000011
338164
Bacteroidota
TTC
Glu
>WENV180412908
OBVB01000021
95875
Bacteroidota
TAG
Leu
>WENV180413255
OBVB01000379
240012
Bacteroidota
CCC
Gly
>WENV180413022
OBVB01000075
147439
Bacteroidota
TCT
Arg
>WENV180413032
OBVB01000084
411550
Bacteroidota
CTG
Gln
>WENV180413033
OBVB01000084
411550
Bacteroidota
CTG
Gln
>WENV180413663
OBVB01044710
338165
Bacteroidota
GGT
Thr
>WENV180412977
OBVB01000046
239647
Bacteroidota
TTT
Lys
>WENV180413031
OBVB01000083
239647
Bacteroidota
TTT
Lys
>WENV180413240
OBVB01000340
23696
Bacteroidota
GCT
Ser
>WENV180412922
OBVB01000029
338125
Bacteroidota
CCT
Arg
>WENV180412993
OBVB01000056
338125
Bacteroidota
CCT
Arg
>WENV180412870
OBVB01000003
235129
Bacteroidota
GCC
Gly
>WENV180413226
OBVB01000325
235129
Bacteroidota
GCC
Gly
>WENV180413340
OBVB01000631
235129
Bacteroidota
GCC
Gly
>WENV180413047
OBVB01000094
411629
Bacteroidota
TTG
Gln
>WENV180413241
OBVB01000352
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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