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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180415571
OBVF01000001
338155
Bacteroidota
CTC
Glu
>WENV180415604
OBVF01000020
411543
Bacteroidota
CTG
Gln
>WENV180415628
OBVF01000029
126641
Bacteroidota
TAC
Val
>WENV180415629
OBVF01000029
126641
Bacteroidota
TAC
Val
>WENV180415581
OBVF01000003
338132
Bacteroidota
GCA
Cys
>WENV180415631
OBVF01000030
301449
Bacteroidota
CGG
Pro
>WENV180415573
OBVF01000001
144933
Bacteroidota
TCT
Arg
>WENV180415583
OBVF01000004
80607
Bacteroidota
GTA
Tyr
>WENV180415668
OBVF01000076
338165
Bacteroidota
GGT
Thr
>WENV180415582
OBVF01000004
19317
Bacteroidota
GGA
Ser
>WENV180415587
OBVF01000010
55270
Bacteroidota
TGA
Ser
>WENV180415589
OBVF01000010
55270
Bacteroidota
TGA
Ser
>WENV180415660
OBVF01000064
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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