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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
96 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180416195
OBVG01000411
235097
Bacteroidota
TTT
Lys
>WENV180416113
OBVG01000258
235102
Bacteroidota
CGT
Thr
>WENV180415874
OBVG01000036
144657
Bacteroidota
CGG
Pro
>WENV180415999
OBVG01000116
338155
Bacteroidota
CTC
Glu
>WENV180416241
OBVG01000505
338155
Bacteroidota
CTC
Glu
>WENV180416030
OBVG01000162
343138
Bacteroidota
CCT
Arg
>WENV180415938
OBVG01000063
58715
Bacteroidota
GAG
Leu
>WENV180415889
OBVG01000041
46165
Bacteroidota
TGA
Ser
>WENV180415807
OBVG01000003
95618
Bacteroidota
TAG
Leu
>WENV180415858
OBVG01000028
338486
Bacteroidota
CAT
Met
>WENV180415923
OBVG01000055
338486
Bacteroidota
CAT
Met
>WENV180416042
OBVG01000177
415410
Bacteroidota
TTG
Gln
>WENV180416266
OBVG01000584
415410
Bacteroidota
TTG
Gln
>WENV180415868
OBVG01000033
411543
Bacteroidota
CTG
Gln
>WENV180415871
OBVG01000036
59689
Bacteroidota
CAG
Leu
>WENV180415937
OBVG01000063
59689
Bacteroidota
CAG
Leu
>WENV180415877
OBVG01000036
20893
Bacteroidota
GGA
Ser
>WENV180415890
OBVG01000041
20893
Bacteroidota
GGA
Ser
>WENV180416021
OBVG01000149
235182
Bacteroidota
>WENV180416210
OBVG01000443
272983
Bacteroidota
CGT
Thr
>WENV180415859
OBVG01000029
338124
Bacteroidota
CCG
Arg
>WENV180415814
OBVG01000006
235203
Bacteroidota
TTT
Lys
>WENV180415870
OBVG01000035
235203
Bacteroidota
TTT
Lys
>WENV180415886
OBVG01000041
238121
Bacteroidota
CTT
Lys
>WENV180415887
OBVG01000041
238121
Bacteroidota
CTT
Lys
>WENV180415924
OBVG01000056
338132
Bacteroidota
GCA
Cys
>WENV180415962
OBVG01000076
338132
Bacteroidota
GCA
Cys
>WENV180416198
OBVG01000417
338132
Bacteroidota
GCA
Cys
>WENV180416249
OBVG01000532
338132
Bacteroidota
GCA
Cys
>WENV180416043
OBVG01000179
144688
Bacteroidota
CAT
Met
>WENV180415888
OBVG01000041
45423
Bacteroidota
TGA
Ser
>WENV180416231
OBVG01000480
193809
Bacteroidota
CAT
Met
>WENV180415842
OBVG01000020
181746
Bacteroidota
GGC
Ala
>WENV180416015
OBVG01000140
58714
Bacteroidota
CAA
Leu
>WENV180416361
OBVG01000993
301449
Bacteroidota
CGG
Pro
>WENV180415830
OBVG01000014
144933
Bacteroidota
TCT
Arg
>WENV180415991
OBVG01000106
144933
Bacteroidota
TCT
Arg
>WENV180415958
OBVG01000075
144656
Bacteroidota
GTG
His
>WENV180416215
OBVG01000449
235207
Bacteroidota
CAT
Met
>WENV180416343
OBVG01000878
235207
Bacteroidota
CAT
Met
>WENV180416196
OBVG01000412
144659
Bacteroidota
GTG
His
>WENV180416197
OBVG01000412
144659
Bacteroidota
GTG
His
>WENV180415826
OBVG01000011
235180
Bacteroidota
CCA
Trp
>WENV180415875
OBVG01000036
235180
Bacteroidota
CCA
Trp
>WENV180416388
OBVG01001215
144596
Bacteroidota
GGC
Ala
>WENV180415832
OBVG01000016
80607
Bacteroidota
GTA
Tyr
>WENV180416096
OBVG01000220
80607
Bacteroidota
GTA
Tyr
>WENV180416173
OBVG01000367
80607
Bacteroidota
GTA
Tyr
>WENV180416358
OBVG01000956
80607
Bacteroidota
GTA
Tyr
>WENV180416256
OBVG01000550
113604
Bacteroidota
>WENV180415891
OBVG01000043
16999
Bacteroidota
GGA
Ser
>WENV180416179
OBVG01000390
16999
Bacteroidota
GGA
Ser
>WENV180415813
OBVG01000006
80614
Bacteroidota
>WENV180415824
OBVG01000011
80614
Bacteroidota
>WENV180416036
OBVG01000167
80614
Bacteroidota
>WENV180415879
OBVG01000037
52358
Bacteroidota
TGA
Ser
>WENV180415880
OBVG01000037
52358
Bacteroidota
TGA
Ser
>WENV180415944
OBVG01000071
52358
Bacteroidota
TGA
Ser
>WENV180415957
OBVG01000075
52358
Bacteroidota
TGA
Ser
>WENV180415994
OBVG01000107
52358
Bacteroidota
TGA
Ser
>WENV180416119
OBVG01000271
52358
Bacteroidota
TGA
Ser
>WENV180416094
OBVG01000220
144590
Bacteroidota
GTT
Asn
>WENV180416723
OBVG01077848
144590
Bacteroidota
GTT
Asn
>WENV180416322
OBVG01000797
95559
Bacteroidota
TAG
Leu
>WENV180415965
OBVG01000079
419272
Bacteroidota
CTG
Gln
>WENV180416120
OBVG01000275
144655
Bacteroidota
GGC
Ala
>WENV180416028
OBVG01000162
338164
Bacteroidota
TTC
Glu
>WENV180416029
OBVG01000162
338164
Bacteroidota
TTC
Glu
>WENV180416380
OBVG01001156
95875
Bacteroidota
TAG
Leu
>WENV180416149
OBVG01000315
338314
Bacteroidota
CCT
Arg
>WENV180415839
OBVG01000019
240012
Bacteroidota
CCC
Gly
>WENV180415816
OBVG01000008
44852
Bacteroidota
TAA
Leu
>WENV180415840
OBVG01000019
147439
Bacteroidota
TCT
Arg
>WENV180415960
OBVG01000076
411550
Bacteroidota
CTG
Gln
>WENV180415961
OBVG01000076
411550
Bacteroidota
CTG
Gln
>WENV180415825
OBVG01000011
338165
Bacteroidota
GGT
Thr
>WENV180416057
OBVG01000189
338165
Bacteroidota
GGT
Thr
>WENV180416097
OBVG01000220
338165
Bacteroidota
GGT
Thr
>WENV180416244
OBVG01000518
338165
Bacteroidota
GGT
Thr
>WENV180415945
OBVG01000071
19528
Bacteroidota
GGA
Ser
>WENV180415869
OBVG01000033
132360
Bacteroidota
GGG
Pro
>WENV180416122
OBVG01000279
132360
Bacteroidota
GGG
Pro
>WENV180416362
OBVG01001008
132360
Bacteroidota
GGG
Pro
>WENV180416224
OBVG01000465
425638
Bacteroidota
CTG
Gln
>WENV180415852
OBVG01000025
185921
Bacteroidota
GTC
Asp
>WENV180415853
OBVG01000025
185921
Bacteroidota
GTC
Asp
>WENV180415959
OBVG01000076
23696
Bacteroidota
GCT
Ser
>WENV180416240
OBVG01000505
23696
Bacteroidota
GCT
Ser
>WENV180416178
OBVG01000388
16224
Bacteroidota
GGA
Ser
>WENV180415966
OBVG01000079
16220
Bacteroidota
GGA
Ser
>WENV180415817
OBVG01000008
338125
Bacteroidota
CCT
Arg
>WENV180415844
OBVG01000021
338125
Bacteroidota
CCT
Arg
>WENV180415936
OBVG01000063
235129
Bacteroidota
GCC
Gly
>WENV180416154
OBVG01000319
235129
Bacteroidota
GCC
Gly
>WENV180416152
OBVG01000319
235129
Bacteroidota
GCC
Gly
>WENV180416054
OBVG01000186
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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