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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
71 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180418996
OBVM01000002
235097
Bacteroidota
TTT
Lys
>WENV180419080
OBVM01000078
235097
Bacteroidota
TTT
Lys
>WENV180419111
OBVM01000129
235102
Bacteroidota
CGT
Thr
>WENV180419038
OBVM01000042
144657
Bacteroidota
CGG
Pro
>WENV180419035
OBVM01000040
338155
Bacteroidota
CTC
Glu
>WENV180419106
OBVM01000122
339341
Bacteroidota
GGT
Thr
>WENV180419070
OBVM01000061
343138
Bacteroidota
CCT
Arg
>WENV180419114
OBVM01000130
58715
Bacteroidota
GAG
Leu
>WENV180419212
OBVM01000331
46165
Bacteroidota
TGA
Ser
>WENV180419110
OBVM01000128
338486
Bacteroidota
CAT
Met
>WENV180419248
OBVM01000548
338486
Bacteroidota
CAT
Met
>WENV180419010
OBVM01000008
415410
Bacteroidota
TTG
Gln
>WENV180419087
OBVM01000100
415410
Bacteroidota
TTG
Gln
>WENV180419036
OBVM01000042
59689
Bacteroidota
CAG
Leu
>WENV180419113
OBVM01000130
59689
Bacteroidota
CAG
Leu
>WENV180419017
OBVM01000016
338124
Bacteroidota
CCG
Arg
>WENV180419180
OBVM01000234
235203
Bacteroidota
TTT
Lys
>WENV180419249
OBVM01000559
235203
Bacteroidota
TTT
Lys
>WENV180419098
OBVM01000119
238121
Bacteroidota
CTT
Lys
>WENV180419099
OBVM01000119
238121
Bacteroidota
CTT
Lys
>WENV180419005
OBVM01000006
338132
Bacteroidota
GCA
Cys
>WENV180419064
OBVM01000053
338132
Bacteroidota
GCA
Cys
>WENV180419289
OBVM01000803
338132
Bacteroidota
GCA
Cys
>WENV180419100
OBVM01000119
45423
Bacteroidota
TGA
Ser
>WENV180419072
OBVM01000063
193809
Bacteroidota
CAT
Met
>WENV180419026
OBVM01000032
58714
Bacteroidota
CAA
Leu
>WENV180419032
OBVM01000039
144933
Bacteroidota
TCT
Arg
>WENV180419022
OBVM01000022
144656
Bacteroidota
GTG
His
>WENV180419184
OBVM01000237
235207
Bacteroidota
CAT
Met
>WENV180419140
OBVM01000177
144659
Bacteroidota
GTG
His
>WENV180419141
OBVM01000177
144659
Bacteroidota
GTG
His
>WENV180419039
OBVM01000042
235180
Bacteroidota
CCA
Trp
>WENV180419107
OBVM01000122
235180
Bacteroidota
CCA
Trp
>WENV180418992
OBVM01000002
80607
Bacteroidota
GTA
Tyr
>WENV180419003
OBVM01000005
80607
Bacteroidota
GTA
Tyr
>WENV180419091
OBVM01000114
113604
Bacteroidota
>WENV180419094
OBVM01000114
113604
Bacteroidota
>WENV180419191
OBVM01000254
80614
Bacteroidota
>WENV180418994
OBVM01000002
52358
Bacteroidota
TGA
Ser
>WENV180419055
OBVM01000048
52358
Bacteroidota
TGA
Ser
>WENV180419156
OBVM01000215
52358
Bacteroidota
TGA
Ser
>WENV180419222
OBVM01000366
52358
Bacteroidota
TGA
Ser
>WENV180419465
OBVM01020299
52358
Bacteroidota
TGA
Ser
>WENV180419153
OBVM01000207
144590
Bacteroidota
GTT
Asn
>WENV180419154
OBVM01000207
144590
Bacteroidota
GTT
Asn
>WENV180419083
OBVM01000083
95559
Bacteroidota
TAG
Leu
>WENV180419012
OBVM01000009
419272
Bacteroidota
CTG
Gln
>WENV180419066
OBVM01000058
144655
Bacteroidota
GGC
Ala
>WENV180419068
OBVM01000061
338164
Bacteroidota
TTC
Glu
>WENV180419069
OBVM01000061
338164
Bacteroidota
TTC
Glu
>WENV180419027
OBVM01000032
95875
Bacteroidota
TAG
Leu
>WENV180419245
OBVM01000535
240012
Bacteroidota
CCC
Gly
>WENV180419221
OBVM01000362
44852
Bacteroidota
TAA
Leu
>WENV180419096
OBVM01000115
147439
Bacteroidota
TCT
Arg
>WENV180419150
OBVM01000201
411550
Bacteroidota
CTG
Gln
>WENV180419445
OBVM01010522
338165
Bacteroidota
GGT
Thr
>WENV180419056
OBVM01000048
19528
Bacteroidota
GGA
Ser
>WENV180419011
OBVM01000009
132360
Bacteroidota
GGG
Pro
>WENV180419016
OBVM01000014
132360
Bacteroidota
GGG
Pro
>WENV180419014
OBVM01000010
425638
Bacteroidota
CTG
Gln
>WENV180419058
OBVM01000050
185921
Bacteroidota
GTC
Asp
>WENV180419059
OBVM01000050
185921
Bacteroidota
GTC
Asp
>WENV180419034
OBVM01000040
23696
Bacteroidota
GCT
Ser
>WENV180419159
OBVM01000220
23696
Bacteroidota
GCT
Ser
>WENV180419023
OBVM01000022
16224
Bacteroidota
GGA
Ser
>WENV180419013
OBVM01000009
16220
Bacteroidota
GGA
Ser
>WENV180419008
OBVM01000007
338125
Bacteroidota
CCT
Arg
>WENV180419015
OBVM01000012
338125
Bacteroidota
CCT
Arg
>WENV180419112
OBVM01000130
235129
Bacteroidota
GCC
Gly
>WENV180419116
OBVM01000140
235129
Bacteroidota
GCC
Gly
>WENV180419288
OBVM01000772
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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