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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180421697
OBVR01000044
235146
Actinomycetota
CGT
Thr
>WENV180421747
OBVR01000154
235347
Actinomycetota
GGC
Ala
>WENV180421748
OBVR01000154
235347
Actinomycetota
GGC
Ala
>WENV180421753
OBVR01000166
201717
Actinomycetota
CTT
Lys
>WENV180421795
OBVR01000449
144600
Actinomycetota
TGG
Pro
>WENV180421772
OBVR01000337
235194
Actinomycetota
GTG
His
>WENV180421732
OBVR01000101
158720
Actinomycetota
ACG
Arg
>WENV180421733
OBVR01000101
158720
Actinomycetota
ACG
Arg
>WENV180421784
OBVR01000407
411601
Actinomycetota
CCC
Gly
>WENV180421755
OBVR01000189
144826
Actinomycetota
GGG
Pro
>WENV180421715
OBVR01000069
23370
Actinomycetota
GCT
Ser
>WENV180421721
OBVR01000082
174149
Actinomycetota
GAT
Ile
>WENV180421738
OBVR01000126
338239
Actinomycetota
TTC
Glu
>WENV180421811
OBVR01000690
338239
Actinomycetota
TTC
Glu
>WENV180421722
OBVR01000082
235174
Actinomycetota
TGC
Ala
>WENV180421817
OBVR01000880
235101
Actinomycetota
TTT
Lys
>WENV180421729
OBVR01000091
121510
Actinomycetota
TAA
Leu
>WENV180421709
OBVR01000062
356045
Actinomycetota
GAC
Val
>WENV180421765
OBVR01000251
356045
Actinomycetota
GAC
Val
>WENV180421889
OBVR01015507
356045
Actinomycetota
GAC
Val
>WENV180421785
OBVR01000408
145345
Actinomycetota
TAC
Val
>WENV180421710
OBVR01000062
235199
Actinomycetota
CAC
Val
>WENV180421766
OBVR01000251
235199
Actinomycetota
CAC
Val
>WENV180421737
OBVR01000125
44862
Actinomycetota
CGA
Ser
>WENV180421854
OBVR01004855
239204
Actinomycetota
CTT
Lys
>WENV180421695
OBVR01000044
313386
Actinomycetota
CGT
Thr
>WENV180421720
OBVR01000081
367535
Actinomycetota
CTG
Gln
>WENV180421843
OBVR01002176
413665
Actinomycetota
TTG
Gln
>WENV180421786
OBVR01000411
45154
Actinomycetota
TGA
Ser
>WENV180421707
OBVR01000062
254857
Actinomycetota
CCG
Arg
>WENV180421714
OBVR01000069
144700
Actinomycetota
CAT
Met
>WENV180421719
OBVR01000081
295695
Actinomycetota
CTC
Glu
>WENV180421781
OBVR01000393
235148
Actinomycetota
GTT
Asn
>WENV180421810
OBVR01000685
235148
Actinomycetota
GTT
Asn
>WENV180421718
OBVR01000081
53078
Actinomycetota
GGA
Ser
>WENV180421770
OBVR01000277
53078
Actinomycetota
GGA
Ser
>WENV180421828
OBVR01001475
42714
Actinomycetota
GAG
Leu
>WENV180421735
OBVR01000107
144825
Actinomycetota
CAT
Met
>WENV180421813
OBVR01000722
119508
Actinomycetota
TAA
Leu
>WENV180421684
OBVR01000030
235348
Actinomycetota
CCT
Arg
>WENV180421696
OBVR01000044
113601
Actinomycetota
TAG
Leu
>WENV180421760
OBVR01000211
144595
Actinomycetota
CAA
Leu
>WENV180421749
OBVR01000154
163764
Actinomycetota
TGG
Pro
>WENV180421736
OBVR01000108
17009
Actinomycetota
GAG
Leu
>WENV180421816
OBVR01000828
80622
Actinomycetota
CAG
Leu
>WENV180421773
OBVR01000357
243162
Actinomycetota
GTT
Asn
>WENV180421676
OBVR01000022
144660
Actinomycetota
TAC
Val
>WENV180421713
OBVR01000069
95593
Actinomycetota
>WENV180421754
OBVR01000188
144823
Actinomycetota
TCT
Arg
>WENV180421796
OBVR01000529
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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