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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
61 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180422625
OBVV01000095
235097
Bacteroidota
TTT
Lys
>WENV180422778
OBVV01000832
235097
Bacteroidota
TTT
Lys
>WENV180422872
OBVV01002380
235097
Bacteroidota
TTT
Lys
>WENV180422875
OBVV01002411
235097
Bacteroidota
TTT
Lys
>WENV180422817
OBVV01001623
235102
Bacteroidota
CGT
Thr
>WENV180422693
OBVV01000270
144657
Bacteroidota
CGG
Pro
>WENV180423122
OBVV01016174
339341
Bacteroidota
GGT
Thr
>WENV180422733
OBVV01000390
343138
Bacteroidota
CCT
Arg
>WENV180422876
OBVV01002494
58715
Bacteroidota
GAG
Leu
>WENV180422929
OBVV01004091
46165
Bacteroidota
TGA
Ser
>WENV180422894
OBVV01003061
338486
Bacteroidota
CAT
Met
>WENV180422901
OBVV01003222
415410
Bacteroidota
TTG
Gln
>WENV180422718
OBVV01000346
59689
Bacteroidota
CAG
Leu
>WENV180422796
OBVV01001258
338124
Bacteroidota
CCG
Arg
>WENV180422667
OBVV01000211
235203
Bacteroidota
TTT
Lys
>WENV180422786
OBVV01000972
238121
Bacteroidota
CTT
Lys
>WENV180422787
OBVV01000972
238121
Bacteroidota
CTT
Lys
>WENV180422773
OBVV01000716
338132
Bacteroidota
GCA
Cys
>WENV180422814
OBVV01001546
338132
Bacteroidota
GCA
Cys
>WENV180422788
OBVV01000972
45423
Bacteroidota
TGA
Ser
>WENV180422708
OBVV01000325
58714
Bacteroidota
CAA
Leu
>WENV180422699
OBVV01000282
144656
Bacteroidota
GTG
His
>WENV180422887
OBVV01002763
235207
Bacteroidota
CAT
Met
>WENV180423016
OBVV01006279
144659
Bacteroidota
GTG
His
>WENV180423017
OBVV01006279
144659
Bacteroidota
GTG
His
>WENV180422694
OBVV01000270
235180
Bacteroidota
CCA
Trp
>WENV180422739
OBVV01000431
80607
Bacteroidota
GTA
Tyr
>WENV180422810
OBVV01001486
80607
Bacteroidota
GTA
Tyr
>WENV180422834
OBVV01001767
80607
Bacteroidota
GTA
Tyr
>WENV180422928
OBVV01003972
80607
Bacteroidota
GTA
Tyr
>WENV180423123
OBVV01016299
113604
Bacteroidota
>WENV180423079
OBVV01008688
80614
Bacteroidota
>WENV180422765
OBVV01000598
144590
Bacteroidota
GTT
Asn
>WENV180422766
OBVV01000598
144590
Bacteroidota
GTT
Asn
>WENV180423140
OBVV01027162
144590
Bacteroidota
GTT
Asn
>WENV180422805
OBVV01001392
95559
Bacteroidota
TAG
Leu
>WENV180422922
OBVV01003825
95559
Bacteroidota
TAG
Leu
>WENV180422785
OBVV01000970
419272
Bacteroidota
CTG
Gln
>WENV180422753
OBVV01000501
144655
Bacteroidota
GGC
Ala
>WENV180422888
OBVV01002778
144655
Bacteroidota
GGC
Ala
>WENV180422732
OBVV01000390
338164
Bacteroidota
TTC
Glu
>WENV180422666
OBVV01000207
95875
Bacteroidota
TAG
Leu
>WENV180423094
OBVV01009835
240012
Bacteroidota
CCC
Gly
>WENV180422611
OBVV01000060
44852
Bacteroidota
TAA
Leu
>WENV180422690
OBVV01000260
44852
Bacteroidota
TAA
Leu
>WENV180422776
OBVV01000768
44852
Bacteroidota
TAA
Leu
>WENV180422672
OBVV01000217
147439
Bacteroidota
TCT
Arg
>WENV180422823
OBVV01001672
150485
Bacteroidota
GTT
Asn
>WENV180423096
OBVV01010105
338165
Bacteroidota
GGT
Thr
>WENV180422769
OBVV01000655
50727
Bacteroidota
TGA
Ser
>WENV180422813
OBVV01001517
50727
Bacteroidota
TGA
Ser
>WENV180422914
OBVV01003549
50727
Bacteroidota
TGA
Ser
>WENV180422628
OBVV01000102
132360
Bacteroidota
GGG
Pro
>WENV180423104
OBVV01012858
425638
Bacteroidota
CTG
Gln
>WENV180422692
OBVV01000267
185921
Bacteroidota
GTC
Asp
>WENV180422792
OBVV01001130
23696
Bacteroidota
GCT
Ser
>WENV180422836
OBVV01001777
16224
Bacteroidota
GGA
Ser
>WENV180422771
OBVV01000681
16220
Bacteroidota
GGA
Ser
>WENV180422998
OBVV01005590
338125
Bacteroidota
CCT
Arg
>WENV180422878
OBVV01002680
235129
Bacteroidota
GCC
Gly
>WENV180422880
OBVV01002680
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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