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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
77 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180427116
OBWA01000016
235097
Bacteroidota
TTT
Lys
>WENV180427235
OBWA01000129
235097
Bacteroidota
TTT
Lys
>WENV180427331
OBWA01000571
235102
Bacteroidota
CGT
Thr
>WENV180427280
OBWA01000198
144657
Bacteroidota
CGG
Pro
>WENV180427129
OBWA01000022
338155
Bacteroidota
CTC
Glu
>WENV180427292
OBWA01000234
338155
Bacteroidota
CTC
Glu
>WENV180427151
OBWA01000040
343138
Bacteroidota
CCT
Arg
>WENV180427271
OBWA01000187
58715
Bacteroidota
GAG
Leu
>WENV180427073
OBWA01000003
95618
Bacteroidota
TAG
Leu
>WENV180427159
OBWA01000044
338486
Bacteroidota
CAT
Met
>WENV180427282
OBWA01000199
338486
Bacteroidota
CAT
Met
>WENV180427075
OBWA01000004
411543
Bacteroidota
CTG
Gln
>WENV180427180
OBWA01000066
59689
Bacteroidota
CAG
Leu
>WENV180427270
OBWA01000187
59689
Bacteroidota
CAG
Leu
>WENV180427239
OBWA01000134
80835
Bacteroidota
GTA
Tyr
>WENV180427146
OBWA01000031
235182
Bacteroidota
>WENV180427293
OBWA01000244
338124
Bacteroidota
CCG
Arg
>WENV180427071
OBWA01000002
235203
Bacteroidota
TTT
Lys
>WENV180427130
OBWA01000023
235203
Bacteroidota
TTT
Lys
>WENV180427138
OBWA01000028
235203
Bacteroidota
TTT
Lys
>WENV180427173
OBWA01000049
235203
Bacteroidota
TTT
Lys
>WENV180427364
OBWA01001146
235203
Bacteroidota
TTT
Lys
>WENV180427494
OBWA01018296
235203
Bacteroidota
TTT
Lys
>WENV180427160
OBWA01000045
238121
Bacteroidota
CTT
Lys
>WENV180427161
OBWA01000045
238121
Bacteroidota
CTT
Lys
>WENV180427122
OBWA01000021
338132
Bacteroidota
GCA
Cys
>WENV180427254
OBWA01000147
338132
Bacteroidota
GCA
Cys
>WENV180427508
OBWA01026999
338132
Bacteroidota
GCA
Cys
>WENV180427178
OBWA01000063
144688
Bacteroidota
CAT
Met
>WENV180427162
OBWA01000045
45423
Bacteroidota
TGA
Ser
>WENV180427163
OBWA01000045
45423
Bacteroidota
TGA
Ser
>WENV180427147
OBWA01000037
58714
Bacteroidota
CAA
Leu
>WENV180427085
OBWA01000008
144933
Bacteroidota
TCT
Arg
>WENV180427299
OBWA01000260
149691
Bacteroidota
GTT
Asn
>WENV180427390
OBWA01002055
149691
Bacteroidota
GTT
Asn
>WENV180427094
OBWA01000011
149691
Bacteroidota
GTT
Asn
>WENV180427095
OBWA01000011
149691
Bacteroidota
GTT
Asn
>WENV180427298
OBWA01000260
149691
Bacteroidota
GTT
Asn
>WENV180427179
OBWA01000065
144656
Bacteroidota
GTG
His
>WENV180427237
OBWA01000131
235207
Bacteroidota
CAT
Met
>WENV180427274
OBWA01000192
235207
Bacteroidota
CAT
Met
>WENV180427263
OBWA01000153
144659
Bacteroidota
GTG
His
>WENV180427264
OBWA01000153
144659
Bacteroidota
GTG
His
>WENV180427128
OBWA01000022
235180
Bacteroidota
CCA
Trp
>WENV180427281
OBWA01000198
235180
Bacteroidota
CCA
Trp
>WENV180427070
OBWA01000001
144596
Bacteroidota
GGC
Ala
>WENV180427090
OBWA01000009
80607
Bacteroidota
GTA
Tyr
>WENV180427217
OBWA01000100
80607
Bacteroidota
GTA
Tyr
>WENV180427227
OBWA01000119
80607
Bacteroidota
GTA
Tyr
>WENV180427231
OBWA01000120
80607
Bacteroidota
GTA
Tyr
>WENV180427104
OBWA01000013
113604
Bacteroidota
>WENV180427107
OBWA01000013
113604
Bacteroidota
>WENV180427126
OBWA01000022
80614
Bacteroidota
>WENV180427304
OBWA01000279
80614
Bacteroidota
>WENV180427307
OBWA01000292
80614
Bacteroidota
>WENV180427216
OBWA01000099
144590
Bacteroidota
GTT
Asn
>WENV180427230
OBWA01000119
144590
Bacteroidota
GTT
Asn
>WENV180427218
OBWA01000103
95559
Bacteroidota
TAG
Leu
>WENV180427102
OBWA01000012
144655
Bacteroidota
GGC
Ala
>WENV180427152
OBWA01000040
338164
Bacteroidota
TTC
Glu
>WENV180427153
OBWA01000040
338164
Bacteroidota
TTC
Glu
>WENV180427148
OBWA01000037
95875
Bacteroidota
TAG
Leu
>WENV180427096
OBWA01000011
338314
Bacteroidota
CCT
Arg
>WENV180427220
OBWA01000105
240012
Bacteroidota
CCC
Gly
>WENV180427079
OBWA01000005
44852
Bacteroidota
TAA
Leu
>WENV180427221
OBWA01000105
147439
Bacteroidota
TCT
Arg
>WENV180427082
OBWA01000006
411550
Bacteroidota
CTG
Gln
>WENV180427233
OBWA01000127
23696
Bacteroidota
GCT
Ser
>WENV180427478
OBWA01012275
23696
Bacteroidota
GCT
Ser
>WENV180427084
OBWA01000007
16220
Bacteroidota
GGA
Ser
>WENV180427118
OBWA01000016
16220
Bacteroidota
GGA
Ser
>WENV180427077
OBWA01000005
338125
Bacteroidota
CCT
Arg
>WENV180427362
OBWA01001084
338125
Bacteroidota
CCT
Arg
>WENV180427269
OBWA01000187
235129
Bacteroidota
GCC
Gly
>WENV180427278
OBWA01000197
235129
Bacteroidota
GCC
Gly
>WENV180427370
OBWA01001289
235129
Bacteroidota
GCC
Gly
>WENV180427195
OBWA01000076
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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