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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
86 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180435439
OBWM01000060
235097
Bacteroidota
TTT
Lys
>WENV180435623
OBWM01000746
235097
Bacteroidota
TTT
Lys
>WENV180435647
OBWM01000825
235097
Bacteroidota
TTT
Lys
>WENV180435896
OBWM01003348
235102
Bacteroidota
CGT
Thr
>WENV180436079
OBWM01009644
144657
Bacteroidota
CGG
Pro
>WENV180435912
OBWM01003618
243025
Bacteroidota
CAT
Met
>WENV180435667
OBWM01000976
338155
Bacteroidota
CTC
Glu
>WENV180435698
OBWM01001172
150845
Bacteroidota
GTC
Asp
>WENV180435655
OBWM01000850
58715
Bacteroidota
GAG
Leu
>WENV180436092
OBWM01010625
17323
Bacteroidota
GGA
Ser
>WENV180435929
OBWM01004209
95618
Bacteroidota
TAG
Leu
>WENV180435484
OBWM01000172
338486
Bacteroidota
CAT
Met
>WENV180435829
OBWM01002295
338486
Bacteroidota
CAT
Met
>WENV180435523
OBWM01000272
48053
Bacteroidota
TGA
Ser
>WENV180435581
OBWM01000587
48053
Bacteroidota
TGA
Ser
>WENV180435748
OBWM01001491
48053
Bacteroidota
TGA
Ser
>WENV180435793
OBWM01001899
48053
Bacteroidota
TGA
Ser
>WENV180435816
OBWM01002130
48053
Bacteroidota
TGA
Ser
>WENV180435908
OBWM01003544
48053
Bacteroidota
TGA
Ser
>WENV180435931
OBWM01004294
48053
Bacteroidota
TGA
Ser
>WENV180435418
OBWM01000022
415410
Bacteroidota
TTG
Gln
>WENV180435630
OBWM01000772
415410
Bacteroidota
TTG
Gln
>WENV180435767
OBWM01001644
415410
Bacteroidota
TTG
Gln
>WENV180435772
OBWM01001700
415410
Bacteroidota
TTG
Gln
>WENV180435998
OBWM01006223
411543
Bacteroidota
CTG
Gln
>WENV180435610
OBWM01000696
59689
Bacteroidota
CAG
Leu
>WENV180435654
OBWM01000850
59689
Bacteroidota
CAG
Leu
>WENV180436004
OBWM01006426
344692
Bacteroidota
GGT
Thr
>WENV180435573
OBWM01000538
338124
Bacteroidota
CCG
Arg
>WENV180436065
OBWM01009186
168744
Bacteroidota
GTG
His
>WENV180435810
OBWM01002079
238121
Bacteroidota
CTT
Lys
>WENV180435811
OBWM01002079
238121
Bacteroidota
CTT
Lys
>WENV180435490
OBWM01000192
126641
Bacteroidota
TAC
Val
>WENV180435491
OBWM01000192
126641
Bacteroidota
TAC
Val
>WENV180435729
OBWM01001358
338132
Bacteroidota
GCA
Cys
>WENV180435864
OBWM01002779
338132
Bacteroidota
GCA
Cys
>WENV180436318
OBWM01078336
338132
Bacteroidota
GCA
Cys
>WENV180436321
OBWM01078351
338132
Bacteroidota
GCA
Cys
>WENV180435812
OBWM01002079
45423
Bacteroidota
TGA
Ser
>WENV180436120
OBWM01013278
45423
Bacteroidota
TGA
Ser
>WENV180435562
OBWM01000470
58714
Bacteroidota
CAA
Leu
>WENV180435514
OBWM01000254
144933
Bacteroidota
TCT
Arg
>WENV180435854
OBWM01002739
144933
Bacteroidota
TCT
Arg
>WENV180435531
OBWM01000310
144656
Bacteroidota
GTG
His
>WENV180435451
OBWM01000092
235207
Bacteroidota
CAT
Met
>WENV180435776
OBWM01001769
235207
Bacteroidota
CAT
Met
>WENV180435713
OBWM01001228
144659
Bacteroidota
GTG
His
>WENV180435714
OBWM01001228
144659
Bacteroidota
GTG
His
>WENV180435438
OBWM01000058
235180
Bacteroidota
CCA
Trp
>WENV180435534
OBWM01000330
144596
Bacteroidota
GGC
Ala
>WENV180435795
OBWM01001993
144596
Bacteroidota
GGC
Ala
>WENV180436246
OBWM01042689
80607
Bacteroidota
GTA
Tyr
>WENV180436301
OBWM01077352
80607
Bacteroidota
GTA
Tyr
>WENV180435626
OBWM01000765
80607
Bacteroidota
GTA
Tyr
>WENV180435668
OBWM01000980
80607
Bacteroidota
GTA
Tyr
>WENV180435832
OBWM01002356
80607
Bacteroidota
GTA
Tyr
>WENV180435866
OBWM01002796
80614
Bacteroidota
>WENV180435986
OBWM01005773
154643
Bacteroidota
CAT
Met
>WENV180435684
OBWM01001115
144590
Bacteroidota
GTT
Asn
>WENV180436315
OBWM01078289
144590
Bacteroidota
GTT
Asn
>WENV180435548
OBWM01000415
95559
Bacteroidota
TAG
Leu
>WENV180436148
OBWM01017954
95559
Bacteroidota
TAG
Leu
>WENV180435541
OBWM01000371
419272
Bacteroidota
CTG
Gln
>WENV180435865
OBWM01002787
144655
Bacteroidota
GGC
Ala
>WENV180435691
OBWM01001138
338164
Bacteroidota
TTC
Glu
>WENV180435692
OBWM01001138
338164
Bacteroidota
TTC
Glu
>WENV180435528
OBWM01000283
95875
Bacteroidota
TAG
Leu
>WENV180435637
OBWM01000801
240012
Bacteroidota
CCC
Gly
>WENV180435870
OBWM01002828
44852
Bacteroidota
TAA
Leu
>WENV180436013
OBWM01006894
44852
Bacteroidota
TAA
Leu
>WENV180436028
OBWM01007334
44852
Bacteroidota
TAA
Leu
>WENV180435700
OBWM01001195
147439
Bacteroidota
TCT
Arg
>WENV180435782
OBWM01001828
411550
Bacteroidota
CTG
Gln
>WENV180435783
OBWM01001828
411550
Bacteroidota
CTG
Gln
>WENV180435833
OBWM01002356
338165
Bacteroidota
GGT
Thr
>WENV180435666
OBWM01000976
23696
Bacteroidota
GCT
Ser
>WENV180436014
OBWM01006907
414426
Bacteroidota
CTG
Gln
>WENV180435741
OBWM01001461
16224
Bacteroidota
GGA
Ser
>WENV180435774
OBWM01001732
16224
Bacteroidota
GGA
Ser
>WENV180435841
OBWM01002522
16220
Bacteroidota
GGA
Ser
>WENV180435891
OBWM01003234
338125
Bacteroidota
CCT
Arg
>WENV180435961
OBWM01004955
338125
Bacteroidota
CCT
Arg
>WENV180435608
OBWM01000688
235129
Bacteroidota
GCC
Gly
>WENV180435653
OBWM01000850
235129
Bacteroidota
GCC
Gly
>WENV180435755
OBWM01001539
235129
Bacteroidota
GCC
Gly
>WENV180435595
OBWM01000643
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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