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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
91 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180437832
OBWQ01000079
235146
Actinomycetota
CGT
Thr
>WENV180438098
OBWQ01001122
119475
Actinomycetota
TAA
Leu
>WENV180437760
OBWQ01000042
235347
Actinomycetota
GGC
Ala
>WENV180437761
OBWQ01000042
235347
Actinomycetota
GGC
Ala
>WENV180437858
OBWQ01000109
235347
Actinomycetota
GGC
Ala
>WENV180437859
OBWQ01000109
235347
Actinomycetota
GGC
Ala
>WENV180437995
OBWQ01000444
235153
Actinomycetota
CCT
Arg
>WENV180438028
OBWQ01000546
144589
Actinomycetota
ACG
Arg
>WENV180438029
OBWQ01000546
144589
Actinomycetota
ACG
Arg
>WENV180438024
OBWQ01000516
37070
Actinomycetota
CGA
Ser
>WENV180438103
OBWQ01001335
235092
Actinomycetota
CCG
Arg
>WENV180437846
OBWQ01000092
235194
Actinomycetota
GTG
His
>WENV180437830
OBWQ01000079
273786
Actinomycetota
CGT
Thr
>WENV180437993
OBWQ01000443
158720
Actinomycetota
ACG
Arg
>WENV180437994
OBWQ01000443
158720
Actinomycetota
ACG
Arg
>WENV180437822
OBWQ01000075
245301
Actinomycetota
GCC
Gly
>WENV180437824
OBWQ01000075
245301
Actinomycetota
GCC
Gly
>WENV180437825
OBWQ01000075
245301
Actinomycetota
GCC
Gly
>WENV180437969
OBWQ01000305
411601
Actinomycetota
CCC
Gly
>WENV180437794
OBWQ01000062
144826
Actinomycetota
GGG
Pro
>WENV180437903
OBWQ01000150
23370
Actinomycetota
GCT
Ser
>WENV180437745
OBWQ01000033
174149
Actinomycetota
GAT
Ile
>WENV180437847
OBWQ01000094
338239
Actinomycetota
TTC
Glu
>WENV180438102
OBWQ01001296
162208
Actinomycetota
TAC
Val
>WENV180437918
OBWQ01000184
16219
Actinomycetota
GCT
Ser
>WENV180437746
OBWQ01000033
235174
Actinomycetota
TGC
Ala
>WENV180438047
OBWQ01000694
235174
Actinomycetota
TGC
Ala
>WENV180437955
OBWQ01000256
235101
Actinomycetota
TTT
Lys
>WENV180438018
OBWQ01000505
235101
Actinomycetota
TTT
Lys
>WENV180437757
OBWQ01000042
121510
Actinomycetota
TAA
Leu
>WENV180437911
OBWQ01000163
356045
Actinomycetota
GAC
Val
>WENV180437966
OBWQ01000301
356045
Actinomycetota
GAC
Val
>WENV180438026
OBWQ01000541
144625
Actinomycetota
GTC
Asp
>WENV180438071
OBWQ01000812
144625
Actinomycetota
GTC
Asp
>WENV180438114
OBWQ01001414
153948
Actinomycetota
GGG
Pro
>WENV180437829
OBWQ01000078
44855
Actinomycetota
TGA
Ser
>WENV180437912
OBWQ01000163
235199
Actinomycetota
CAC
Val
>WENV180437967
OBWQ01000301
235199
Actinomycetota
CAC
Val
>WENV180437828
OBWQ01000078
44862
Actinomycetota
CGA
Ser
>WENV180437759
OBWQ01000042
413665
Actinomycetota
TTG
Gln
>WENV180437857
OBWQ01000109
413665
Actinomycetota
TTG
Gln
>WENV180437909
OBWQ01000163
254857
Actinomycetota
CCG
Arg
>WENV180438081
OBWQ01000887
144593
Actinomycetota
TAT
Ile
>WENV180437902
OBWQ01000150
144700
Actinomycetota
CAT
Met
>WENV180438115
OBWQ01001437
238473
Actinomycetota
GTG
His
>WENV180437875
OBWQ01000117
144636
Actinomycetota
GAT
Ile
>WENV180437877
OBWQ01000117
144636
Actinomycetota
GAT
Ile
>WENV180437915
OBWQ01000165
243671
Actinomycetota
CTC
Glu
>WENV180437997
OBWQ01000449
243671
Actinomycetota
CTC
Glu
>WENV180437957
OBWQ01000258
98279
Actinomycetota
GTA
Tyr
>WENV180437916
OBWQ01000165
338148
Actinomycetota
CTG
Gln
>WENV180437998
OBWQ01000449
338148
Actinomycetota
CTG
Gln
>WENV180438032
OBWQ01000565
235148
Actinomycetota
GTT
Asn
>WENV180438033
OBWQ01000565
235148
Actinomycetota
GTT
Asn
>WENV180438038
OBWQ01000591
235148
Actinomycetota
GTT
Asn
>WENV180438039
OBWQ01000591
235148
Actinomycetota
GTT
Asn
>WENV180438040
OBWQ01000591
235148
Actinomycetota
GTT
Asn
>WENV180438080
OBWQ01000880
235148
Actinomycetota
GTT
Asn
>WENV180437770
OBWQ01000053
338238
Actinomycetota
CCA
Trp
>WENV180438073
OBWQ01000817
176456
Actinomycetota
TCT
Arg
>WENV180437904
OBWQ01000152
144825
Actinomycetota
CAT
Met
>WENV180437890
OBWQ01000132
338139
Actinomycetota
GTT
Asn
>WENV180437891
OBWQ01000132
338139
Actinomycetota
GTT
Asn
>WENV180437920
OBWQ01000189
235348
Actinomycetota
CCT
Arg
>WENV180438084
OBWQ01000896
411554
Actinomycetota
CCC
Gly
>WENV180437831
OBWQ01000079
113601
Actinomycetota
TAG
Leu
>WENV180438091
OBWQ01001004
113601
Actinomycetota
TAG
Leu
>WENV180437758
OBWQ01000042
144595
Actinomycetota
CAA
Leu
>WENV180437856
OBWQ01000109
144595
Actinomycetota
CAA
Leu
>WENV180438086
OBWQ01000938
144595
Actinomycetota
CAA
Leu
>WENV180437928
OBWQ01000201
145343
Actinomycetota
GGG
Pro
>WENV180437961
OBWQ01000275
235149
Actinomycetota
CCT
Arg
>WENV180437896
OBWQ01000143
414234
Actinomycetota
CTG
Gln
>WENV180437762
OBWQ01000042
163764
Actinomycetota
TGG
Pro
>WENV180437860
OBWQ01000109
163764
Actinomycetota
TGG
Pro
>WENV180438090
OBWQ01001004
235121
Actinomycetota
CGT
Thr
>WENV180437952
OBWQ01000252
47164
Actinomycetota
GGA
Ser
>WENV180438025
OBWQ01000526
144635
Actinomycetota
TGG
Pro
>WENV180437784
OBWQ01000056
61501
Actinomycetota
CAG
Leu
>WENV180438049
OBWQ01000702
80622
Actinomycetota
CAG
Leu
>WENV180438085
OBWQ01000908
80622
Actinomycetota
CAG
Leu
>WENV180438116
OBWQ01001442
44851
Actinomycetota
TGA
Ser
>WENV180437923
OBWQ01000197
16222
Actinomycetota
GAG
Leu
>WENV180438123
OBWQ01001885
158513
Actinomycetota
TGG
Pro
>WENV180437823
OBWQ01000075
412834
Actinomycetota
GCA
Cys
>WENV180438048
OBWQ01000694
235173
Actinomycetota
GGC
Ala
>WENV180438096
OBWQ01001077
235173
Actinomycetota
GGC
Ala
>WENV180437983
OBWQ01000382
144660
Actinomycetota
TAC
Val
>WENV180438014
OBWQ01000491
183544
Actinomycetota
CAT
Met
>WENV180437901
OBWQ01000150
95593
Actinomycetota
>WENV180437929
OBWQ01000206
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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