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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
52 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180437708
OBWQ01000012
235097
Bacteroidota
TTT
Lys
>WENV180437802
OBWQ01000068
235097
Bacteroidota
TTT
Lys
>WENV180437861
OBWQ01000110
95987
Bacteroidota
CAA
Leu
>WENV180437711
OBWQ01000013
339412
Bacteroidota
GGT
Thr
>WENV180437755
OBWQ01000038
235102
Bacteroidota
CGT
Thr
>WENV180437818
OBWQ01000072
97336
Bacteroidota
CAG
Leu
>WENV180437727
OBWQ01000021
338155
Bacteroidota
CTC
Glu
>WENV180437679
OBWQ01000003
95618
Bacteroidota
TAG
Leu
>WENV180437675
OBWQ01000001
48053
Bacteroidota
TGA
Ser
>WENV180437753
OBWQ01000037
48053
Bacteroidota
TGA
Ser
>WENV180437840
OBWQ01000083
48053
Bacteroidota
TGA
Ser
>WENV180437953
OBWQ01000253
48053
Bacteroidota
TGA
Ser
>WENV180437798
OBWQ01000065
413663
Bacteroidota
CTG
Gln
>WENV180437799
OBWQ01000065
413663
Bacteroidota
CTG
Gln
>WENV180437766
OBWQ01000046
415410
Bacteroidota
TTG
Gln
>WENV180437691
OBWQ01000007
411543
Bacteroidota
CTG
Gln
>WENV180437712
OBWQ01000013
237797
Bacteroidota
CCA
Trp
>WENV180437752
OBWQ01000035
412479
Bacteroidota
TTG
Gln
>WENV180437742
OBWQ01000032
147147
Bacteroidota
GTG
His
>WENV180437743
OBWQ01000032
147147
Bacteroidota
GTG
His
>WENV180437698
OBWQ01000008
235182
Bacteroidota
>WENV180437673
OBWQ01000001
272983
Bacteroidota
CGT
Thr
>WENV180437723
OBWQ01000019
338124
Bacteroidota
CCG
Arg
>WENV180437676
OBWQ01000001
338132
Bacteroidota
GCA
Cys
>WENV180437736
OBWQ01000028
338132
Bacteroidota
GCA
Cys
>WENV180437767
OBWQ01000051
144688
Bacteroidota
CAT
Met
>WENV180437750
OBWQ01000035
37076
Bacteroidota
TAA
Leu
>WENV180437685
OBWQ01000004
181746
Bacteroidota
GGC
Ala
>WENV180437703
OBWQ01000010
144933
Bacteroidota
TCT
Arg
>WENV180437699
OBWQ01000009
144656
Bacteroidota
GTG
His
>WENV180437705
OBWQ01000011
235207
Bacteroidota
CAT
Met
>WENV180437864
OBWQ01000111
235207
Bacteroidota
CAT
Met
>WENV180437716
OBWQ01000015
80607
Bacteroidota
GTA
Tyr
>WENV180437801
OBWQ01000066
80607
Bacteroidota
GTA
Tyr
>WENV180437879
OBWQ01000119
80607
Bacteroidota
GTA
Tyr
>WENV180437811
OBWQ01000070
113604
Bacteroidota
>WENV180437814
OBWQ01000070
113604
Bacteroidota
>WENV180437883
OBWQ01000122
344769
Bacteroidota
CTC
Glu
>WENV180437884
OBWQ01000122
344769
Bacteroidota
CTC
Glu
>WENV180437774
OBWQ01000054
144590
Bacteroidota
GTT
Asn
>WENV180437775
OBWQ01000054
144590
Bacteroidota
GTT
Asn
>WENV180437893
OBWQ01000135
95559
Bacteroidota
TAG
Leu
>WENV180437885
OBWQ01000123
419272
Bacteroidota
CTG
Gln
>WENV180437973
OBWQ01000324
144655
Bacteroidota
GGC
Ala
>WENV180437719
OBWQ01000016
338314
Bacteroidota
CCT
Arg
>WENV180437773
OBWQ01000054
44852
Bacteroidota
TAA
Leu
>WENV180437690
OBWQ01000007
132360
Bacteroidota
GGG
Pro
>WENV180437707
OBWQ01000012
132360
Bacteroidota
GGG
Pro
>WENV180437677
OBWQ01000002
19317
Bacteroidota
GGA
Ser
>WENV180437842
OBWQ01000088
16220
Bacteroidota
GGA
Ser
>WENV180437686
OBWQ01000005
338125
Bacteroidota
CCT
Arg
>WENV180437728
OBWQ01000022
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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