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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180438348
OBWR01000302
361659
Bacillota
GCC
Gly
>WENV180438386
OBWR01006399
97943
Bacillota
GTA
Tyr
>WENV180438347
OBWR01000302
114359
Bacillota
TAG
Leu
>WENV180438373
OBWR01001337
114359
Bacillota
TAG
Leu
>WENV180438343
OBWR01000259
235294
Bacillota
TGC
Ala
>WENV180438399
OBWR01011032
338208
Bacillota
>WENV180438391
OBWR01007854
186380
Bacillota
GTC
Asp
>WENV180438404
OBWR01011052
338550
Bacillota
>WENV180438389
OBWR01007032
144766
Bacillota
CAT
Met
>WENV180438403
OBWR01011044
263765
Bacillota
TAC
Val
>WENV180438350
OBWR01000302
150597
Bacillota
TCT
Arg
>WENV180438236
OBWR01000024
198250
Bacillota
CAT
Met
>WENV180438378
OBWR01001658
342833
Bacillota
GTT
Asn
>WENV180438349
OBWR01000302
411739
Bacillota
TCC
Gly
>WENV180438390
OBWR01007347
235638
Bacillota
GAA
Phe
>WENV180438346
OBWR01000302
237963
Bacillota
TTT
Lys
>WENV180438344
OBWR01000302
279635
Bacillota
GTG
His
>WENV180438402
OBWR01011044
353527
Bacillota
TTC
Glu
>WENV180438374
OBWR01001337
144762
Bacillota
TCT
Arg
>WENV180438367
OBWR01001337
338207
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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