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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
115 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180444274
OBWZ01000447
235146
Actinomycetota
CGT
Thr
>WENV180443861
OBWZ01000004
413566
Actinomycetota
CCC
Gly
>WENV180444206
OBWZ01000300
235347
Actinomycetota
GGC
Ala
>WENV180444207
OBWZ01000300
235347
Actinomycetota
GGC
Ala
>WENV180444289
OBWZ01000519
235347
Actinomycetota
GGC
Ala
>WENV180444290
OBWZ01000519
235347
Actinomycetota
GGC
Ala
>WENV180443944
OBWZ01000023
144589
Actinomycetota
ACG
Arg
>WENV180443945
OBWZ01000023
144589
Actinomycetota
ACG
Arg
>WENV180443915
OBWZ01000016
201717
Actinomycetota
CTT
Lys
>WENV180444226
OBWZ01000344
201717
Actinomycetota
CTT
Lys
>WENV180444471
OBWZ01016584
314498
Actinomycetota
GGC
Ala
>WENV180444091
OBWZ01000109
144600
Actinomycetota
TGG
Pro
>WENV180444375
OBWZ01003022
261773
Actinomycetota
CCT
Arg
>WENV180444168
OBWZ01000195
158720
Actinomycetota
ACG
Arg
>WENV180444345
OBWZ01001418
158720
Actinomycetota
ACG
Arg
>WENV180444359
OBWZ01001779
158720
Actinomycetota
ACG
Arg
>WENV180443829
OBWZ01000002
158373
Actinomycetota
GGG
Pro
>WENV180444262
OBWZ01000413
144826
Actinomycetota
GGG
Pro
>WENV180444033
OBWZ01000070
23370
Actinomycetota
GCT
Ser
>WENV180444259
OBWZ01000376
23370
Actinomycetota
GCT
Ser
>WENV180444045
OBWZ01000076
174149
Actinomycetota
GAT
Ile
>WENV180444199
OBWZ01000266
174149
Actinomycetota
GAT
Ile
>WENV180443923
OBWZ01000017
338239
Actinomycetota
TTC
Glu
>WENV180444281
OBWZ01000479
338239
Actinomycetota
TTC
Glu
>WENV180444025
OBWZ01000068
235174
Actinomycetota
TGC
Ala
>WENV180444046
OBWZ01000076
235174
Actinomycetota
TGC
Ala
>WENV180444200
OBWZ01000266
235174
Actinomycetota
TGC
Ala
>WENV180443914
OBWZ01000016
235101
Actinomycetota
TTT
Lys
>WENV180443991
OBWZ01000055
235101
Actinomycetota
TTT
Lys
>WENV180444175
OBWZ01000208
121510
Actinomycetota
TAA
Leu
>WENV180444011
OBWZ01000064
356045
Actinomycetota
GAC
Val
>WENV180444029
OBWZ01000070
356045
Actinomycetota
GAC
Val
>WENV180444212
OBWZ01000322
356045
Actinomycetota
GAC
Val
>WENV180444257
OBWZ01000375
356045
Actinomycetota
GAC
Val
>WENV180444402
OBWZ01006186
153948
Actinomycetota
GGG
Pro
>WENV180444372
OBWZ01002848
150473
Actinomycetota
CTC
Glu
>WENV180444373
OBWZ01002848
150473
Actinomycetota
CTC
Glu
>WENV180443999
OBWZ01000059
145345
Actinomycetota
TAC
Val
>WENV180444012
OBWZ01000064
235199
Actinomycetota
CAC
Val
>WENV180444030
OBWZ01000070
235199
Actinomycetota
CAC
Val
>WENV180444213
OBWZ01000322
235199
Actinomycetota
CAC
Val
>WENV180444258
OBWZ01000375
235199
Actinomycetota
CAC
Val
>WENV180444297
OBWZ01000640
44862
Actinomycetota
CGA
Ser
>WENV180444154
OBWZ01000188
338235
Actinomycetota
CCC
Gly
>WENV180444227
OBWZ01000349
313386
Actinomycetota
CGT
Thr
>WENV180444272
OBWZ01000447
313386
Actinomycetota
CGT
Thr
>WENV180444167
OBWZ01000191
198659
Actinomycetota
TAC
Val
>WENV180443913
OBWZ01000016
367535
Actinomycetota
CTG
Gln
>WENV180444090
OBWZ01000109
413665
Actinomycetota
TTG
Gln
>WENV180444288
OBWZ01000519
413665
Actinomycetota
TTG
Gln
>WENV180443918
OBWZ01000017
45154
Actinomycetota
TGA
Ser
>WENV180443916
OBWZ01000016
254857
Actinomycetota
CCG
Arg
>WENV180444014
OBWZ01000065
254857
Actinomycetota
CCG
Arg
>WENV180444309
OBWZ01000742
254857
Actinomycetota
CCG
Arg
>WENV180444520
OBWZ01029817
147615
Actinomycetota
GAT
Ile
>WENV180443990
OBWZ01000050
16223
Actinomycetota
GAG
Leu
>WENV180444302
OBWZ01000658
382278
Actinomycetota
GAC
Val
>WENV180444032
OBWZ01000070
144700
Actinomycetota
CAT
Met
>WENV180443969
OBWZ01000033
44942
Actinomycetota
TGA
Ser
>WENV180443939
OBWZ01000023
238473
Actinomycetota
GTG
His
>WENV180444330
OBWZ01001121
144636
Actinomycetota
GAT
Ile
>WENV180443912
OBWZ01000016
295695
Actinomycetota
CTC
Glu
>WENV180444051
OBWZ01000080
295695
Actinomycetota
CTC
Glu
>WENV180444109
OBWZ01000133
295695
Actinomycetota
CTC
Glu
>WENV180444081
OBWZ01000105
98279
Actinomycetota
GTA
Tyr
>WENV180444052
OBWZ01000080
338148
Actinomycetota
CTG
Gln
>WENV180444110
OBWZ01000133
338148
Actinomycetota
CTG
Gln
>WENV180444020
OBWZ01000067
235148
Actinomycetota
GTT
Asn
>WENV180444146
OBWZ01000178
235148
Actinomycetota
GTT
Asn
>WENV180444532
OBWZ01032747
235148
Actinomycetota
GTT
Asn
>WENV180443911
OBWZ01000016
53078
Actinomycetota
GGA
Ser
>WENV180444111
OBWZ01000133
53078
Actinomycetota
GGA
Ser
>WENV180443943
OBWZ01000023
176456
Actinomycetota
TCT
Arg
>WENV180443921
OBWZ01000017
144825
Actinomycetota
CAT
Met
>WENV180444194
OBWZ01000248
145347
Actinomycetota
CAA
Leu
>WENV180444169
OBWZ01000199
119508
Actinomycetota
TAA
Leu
>WENV180443922
OBWZ01000017
235348
Actinomycetota
CCT
Arg
>WENV180444134
OBWZ01000156
235348
Actinomycetota
CCT
Arg
>WENV180444159
OBWZ01000188
37521
Actinomycetota
GCT
Ser
>WENV180444083
OBWZ01000105
16467
Actinomycetota
GCT
Ser
>WENV180444022
OBWZ01000068
411554
Actinomycetota
CCC
Gly
>WENV180444054
OBWZ01000080
113601
Actinomycetota
TAG
Leu
>WENV180444228
OBWZ01000349
113601
Actinomycetota
TAG
Leu
>WENV180444273
OBWZ01000447
113601
Actinomycetota
TAG
Leu
>WENV180444089
OBWZ01000109
144595
Actinomycetota
CAA
Leu
>WENV180444327
OBWZ01001051
144595
Actinomycetota
CAA
Leu
>WENV180443931
OBWZ01000018
145343
Actinomycetota
GGG
Pro
>WENV180444108
OBWZ01000132
431657
Actinomycetota
CCC
Gly
>WENV180444095
OBWZ01000116
235149
Actinomycetota
CCT
Arg
>WENV180444371
OBWZ01002848
414234
Actinomycetota
CTG
Gln
>WENV180444358
OBWZ01001748
153915
Actinomycetota
ACG
Arg
>WENV180444023
OBWZ01000068
91808
Actinomycetota
CAG
Leu
>WENV180444451
OBWZ01012342
246365
Actinomycetota
ACG
Arg
>WENV180443972
OBWZ01000033
145269
Actinomycetota
CAT
Met
>WENV180444053
OBWZ01000080
235121
Actinomycetota
CGT
Thr
>WENV180443970
OBWZ01000033
393408
Actinomycetota
TTC
Glu
>WENV180444195
OBWZ01000248
144635
Actinomycetota
TGG
Pro
>WENV180444193
OBWZ01000246
119485
Actinomycetota
TAA
Leu
>WENV180443855
OBWZ01000004
240124
Actinomycetota
CGT
Thr
>WENV180443917
OBWZ01000017
45852
Actinomycetota
CGA
Ser
>WENV180444107
OBWZ01000132
80622
Actinomycetota
CAG
Leu
>WENV180443835
OBWZ01000002
377770
Actinomycetota
CTG
Gln
>WENV180443845
OBWZ01000002
388111
Actinomycetota
>WENV180443992
OBWZ01000056
16222
Actinomycetota
GAG
Leu
>WENV180444189
OBWZ01000241
16222
Actinomycetota
GAG
Leu
>WENV180444332
OBWZ01001159
158513
Actinomycetota
TGG
Pro
>WENV180444301
OBWZ01000658
412834
Actinomycetota
GCA
Cys
>WENV180444026
OBWZ01000068
235173
Actinomycetota
GGC
Ala
>WENV180444145
OBWZ01000178
235173
Actinomycetota
GGC
Ala
>WENV180444019
OBWZ01000067
243162
Actinomycetota
GTT
Asn
>WENV180443842
OBWZ01000002
344380
Actinomycetota
GAC
Val
>WENV180444270
OBWZ01000440
144660
Actinomycetota
TAC
Val
>WENV180444031
OBWZ01000070
95593
Actinomycetota
>WENV180444098
OBWZ01000126
144823
Actinomycetota
TCT
Arg
>WENV180444275
OBWZ01000454
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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