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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
97 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180466442
OBYG01000863
235102
Bacteroidota
CGT
Thr
>WENV180466284
OBYG01000336
267954
Bacteroidota
GCC
Gly
>WENV180466359
OBYG01000543
267954
Bacteroidota
GCC
Gly
>WENV180466234
OBYG01000225
144657
Bacteroidota
CGG
Pro
>WENV180466075
OBYG01000093
338155
Bacteroidota
CTC
Glu
>WENV180466304
OBYG01000392
338155
Bacteroidota
CTC
Glu
>WENV180466899
OBYG01020810
153993
Bacteroidota
GAT
Ile
>WENV180466061
OBYG01000085
339341
Bacteroidota
GGT
Thr
>WENV180466321
OBYG01000423
58715
Bacteroidota
GAG
Leu
>WENV180466021
OBYG01000065
46165
Bacteroidota
TGA
Ser
>WENV180466459
OBYG01000946
95618
Bacteroidota
TAG
Leu
>WENV180466156
OBYG01000162
338486
Bacteroidota
CAT
Met
>WENV180466050
OBYG01000074
411543
Bacteroidota
CTG
Gln
>WENV180466121
OBYG01000137
59689
Bacteroidota
CAG
Leu
>WENV180466320
OBYG01000423
59689
Bacteroidota
CAG
Leu
>WENV180465947
OBYG01000017
436206
Bacteroidota
TTG
Gln
>WENV180466022
OBYG01000065
20893
Bacteroidota
GGA
Ser
>WENV180466124
OBYG01000137
20893
Bacteroidota
GGA
Ser
>WENV180466118
OBYG01000129
235182
Bacteroidota
>WENV180466006
OBYG01000059
272983
Bacteroidota
CGT
Thr
>WENV180465978
OBYG01000037
338124
Bacteroidota
CCG
Arg
>WENV180466111
OBYG01000122
235203
Bacteroidota
TTT
Lys
>WENV180466300
OBYG01000382
235203
Bacteroidota
TTT
Lys
>WENV180466023
OBYG01000065
238121
Bacteroidota
CTT
Lys
>WENV180466024
OBYG01000065
238121
Bacteroidota
CTT
Lys
>WENV180465963
OBYG01000028
126641
Bacteroidota
TAC
Val
>WENV180465964
OBYG01000028
126641
Bacteroidota
TAC
Val
>WENV180466139
OBYG01000150
126641
Bacteroidota
TAC
Val
>WENV180466116
OBYG01000128
338132
Bacteroidota
GCA
Cys
>WENV180466225
OBYG01000213
338132
Bacteroidota
GCA
Cys
>WENV180466268
OBYG01000295
338132
Bacteroidota
GCA
Cys
>WENV180466293
OBYG01000346
338132
Bacteroidota
GCA
Cys
>WENV180466222
OBYG01000211
144688
Bacteroidota
CAT
Met
>WENV180466025
OBYG01000065
45423
Bacteroidota
TGA
Ser
>WENV180466019
OBYG01000064
193809
Bacteroidota
CAT
Met
>WENV180465939
OBYG01000013
181746
Bacteroidota
GGC
Ala
>WENV180466119
OBYG01000131
58714
Bacteroidota
CAA
Leu
>WENV180465937
OBYG01000012
301449
Bacteroidota
CGG
Pro
>WENV180466055
OBYG01000082
301449
Bacteroidota
CGG
Pro
>WENV180466390
OBYG01000647
301449
Bacteroidota
CGG
Pro
>WENV180466130
OBYG01000145
144933
Bacteroidota
TCT
Arg
>WENV180465987
OBYG01000045
144933
Bacteroidota
TCT
Arg
>WENV180466093
OBYG01000109
144656
Bacteroidota
GTG
His
>WENV180465999
OBYG01000055
235207
Bacteroidota
CAT
Met
>WENV180466049
OBYG01000074
143169
Bacteroidota
GGG
Pro
>WENV180466177
OBYG01000183
143169
Bacteroidota
GGG
Pro
>WENV180466089
OBYG01000107
144659
Bacteroidota
GTG
His
>WENV180466090
OBYG01000107
144659
Bacteroidota
GTG
His
>WENV180466062
OBYG01000085
235180
Bacteroidota
CCA
Trp
>WENV180466235
OBYG01000225
235180
Bacteroidota
CCA
Trp
>WENV180465920
OBYG01000008
80607
Bacteroidota
GTA
Tyr
>WENV180466154
OBYG01000161
80607
Bacteroidota
GTA
Tyr
>WENV180466187
OBYG01000195
80607
Bacteroidota
GTA
Tyr
>WENV180466473
OBYG01001072
80607
Bacteroidota
GTA
Tyr
>WENV180466082
OBYG01000101
80614
Bacteroidota
>WENV180466088
OBYG01000107
80614
Bacteroidota
>WENV180467117
OBYG01095761
144590
Bacteroidota
GTT
Asn
>WENV180466219
OBYG01000209
95559
Bacteroidota
TAG
Leu
>WENV180465993
OBYG01000046
144655
Bacteroidota
GGC
Ala
>WENV180466325
OBYG01000425
338164
Bacteroidota
TTC
Glu
>WENV180466326
OBYG01000425
338164
Bacteroidota
TTC
Glu
>WENV180466120
OBYG01000131
95875
Bacteroidota
TAG
Leu
>WENV180466269
OBYG01000299
151121
Bacteroidota
CAT
Met
>WENV180466058
OBYG01000083
338314
Bacteroidota
CCT
Arg
>WENV180465933
OBYG01000011
139743
Bacteroidota
GGG
Pro
>WENV180466144
OBYG01000156
240012
Bacteroidota
CCC
Gly
>WENV180465970
OBYG01000030
44852
Bacteroidota
TAA
Leu
>WENV180466053
OBYG01000081
147439
Bacteroidota
TCT
Arg
>WENV180466347
OBYG01000499
280513
Bacteroidota
TTT
Lys
>WENV180466443
OBYG01000882
280513
Bacteroidota
TTT
Lys
>WENV180466907
OBYG01021910
150485
Bacteroidota
GTT
Asn
>WENV180466223
OBYG01000213
411550
Bacteroidota
CTG
Gln
>WENV180466224
OBYG01000213
411550
Bacteroidota
CTG
Gln
>WENV180467054
OBYG01057569
338165
Bacteroidota
GGT
Thr
>WENV180466169
OBYG01000173
425638
Bacteroidota
CTG
Gln
>WENV180466246
OBYG01000248
425638
Bacteroidota
CTG
Gln
>WENV180466167
OBYG01000170
94703
Bacteroidota
GTA
Tyr
>WENV180466201
OBYG01000207
94703
Bacteroidota
GTA
Tyr
>WENV180466140
OBYG01000151
185921
Bacteroidota
GTC
Asp
>WENV180466366
OBYG01000559
185921
Bacteroidota
GTC
Asp
>WENV180466432
OBYG01000819
139062
Bacteroidota
TGG
Pro
>WENV180466394
OBYG01000664
23696
Bacteroidota
GCT
Ser
>WENV180466101
OBYG01000113
56823
Bacteroidota
TGA
Ser
>WENV180466112
OBYG01000123
56823
Bacteroidota
TGA
Ser
>WENV180466113
OBYG01000123
56823
Bacteroidota
TGA
Ser
>WENV180466178
OBYG01000185
56823
Bacteroidota
TGA
Ser
>WENV180466185
OBYG01000191
56823
Bacteroidota
TGA
Ser
>WENV180466255
OBYG01000260
56823
Bacteroidota
TGA
Ser
>WENV180466094
OBYG01000109
16224
Bacteroidota
GGA
Ser
>WENV180466355
OBYG01000526
16220
Bacteroidota
GGA
Ser
>WENV180465971
OBYG01000030
338125
Bacteroidota
CCT
Arg
>WENV180466343
OBYG01000481
338125
Bacteroidota
CCT
Arg
>WENV180466319
OBYG01000423
235129
Bacteroidota
GCC
Gly
>WENV180466322
OBYG01000424
235129
Bacteroidota
GCC
Gly
>WENV180466324
OBYG01000424
235129
Bacteroidota
GCC
Gly
>WENV180466045
OBYG01000068
411629
Bacteroidota
TTG
Gln
>WENV180466314
OBYG01000417
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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