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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
78 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180467827
OBYJ01000041
235097
Bacteroidota
TTT
Lys
>WENV180468150
OBYJ01000652
235097
Bacteroidota
TTT
Lys
>WENV180467815
OBYJ01000027
235102
Bacteroidota
CGT
Thr
>WENV180468441
OBYJ01018327
144657
Bacteroidota
CGG
Pro
>WENV180467848
OBYJ01000052
338155
Bacteroidota
CTC
Glu
>WENV180467824
OBYJ01000037
343138
Bacteroidota
CCT
Arg
>WENV180467851
OBYJ01000053
58715
Bacteroidota
GAG
Leu
>WENV180467756
OBYJ01000001
95618
Bacteroidota
TAG
Leu
>WENV180467853
OBYJ01000058
338486
Bacteroidota
CAT
Met
>WENV180468190
OBYJ01000872
338486
Bacteroidota
CAT
Met
>WENV180467781
OBYJ01000011
411543
Bacteroidota
CTG
Gln
>WENV180467850
OBYJ01000053
59689
Bacteroidota
CAG
Leu
>WENV180467968
OBYJ01000152
59689
Bacteroidota
CAG
Leu
>WENV180468163
OBYJ01000717
436206
Bacteroidota
TTG
Gln
>WENV180468286
OBYJ01002300
436206
Bacteroidota
TTG
Gln
>WENV180468362
OBYJ01009463
436206
Bacteroidota
TTG
Gln
>WENV180467873
OBYJ01000074
20893
Bacteroidota
GGA
Ser
>WENV180468100
OBYJ01000415
20893
Bacteroidota
GGA
Ser
>WENV180467839
OBYJ01000045
235182
Bacteroidota
>WENV180467780
OBYJ01000010
272983
Bacteroidota
CGT
Thr
>WENV180468058
OBYJ01000292
338124
Bacteroidota
CCG
Arg
>WENV180467929
OBYJ01000118
235203
Bacteroidota
TTT
Lys
>WENV180468191
OBYJ01000899
235203
Bacteroidota
TTT
Lys
>WENV180467843
OBYJ01000051
238121
Bacteroidota
CTT
Lys
>WENV180467844
OBYJ01000051
238121
Bacteroidota
CTT
Lys
>WENV180467774
OBYJ01000007
338132
Bacteroidota
GCA
Cys
>WENV180467971
OBYJ01000158
338132
Bacteroidota
GCA
Cys
>WENV180468006
OBYJ01000203
338132
Bacteroidota
GCA
Cys
>WENV180468302
OBYJ01003059
338132
Bacteroidota
GCA
Cys
>WENV180468079
OBYJ01000338
144688
Bacteroidota
CAT
Met
>WENV180467845
OBYJ01000051
45423
Bacteroidota
TGA
Ser
>WENV180467991
OBYJ01000177
193809
Bacteroidota
CAT
Met
>WENV180467777
OBYJ01000008
181746
Bacteroidota
GGC
Ala
>WENV180467954
OBYJ01000132
58714
Bacteroidota
CAA
Leu
>WENV180467921
OBYJ01000108
301449
Bacteroidota
CGG
Pro
>WENV180468174
OBYJ01000761
301449
Bacteroidota
CGG
Pro
>WENV180467793
OBYJ01000017
301449
Bacteroidota
CGG
Pro
>WENV180467783
OBYJ01000013
144933
Bacteroidota
TCT
Arg
>WENV180467996
OBYJ01000187
141414
Bacteroidota
GGG
Pro
>WENV180468258
OBYJ01001662
141414
Bacteroidota
GGG
Pro
>WENV180467888
OBYJ01000085
144656
Bacteroidota
GTG
His
>WENV180467952
OBYJ01000131
235207
Bacteroidota
CAT
Met
>WENV180467998
OBYJ01000193
235207
Bacteroidota
CAT
Met
>WENV180467950
OBYJ01000129
144659
Bacteroidota
GTG
His
>WENV180467951
OBYJ01000129
144659
Bacteroidota
GTG
His
>WENV180468020
OBYJ01000213
235180
Bacteroidota
CCA
Trp
>WENV180467794
OBYJ01000018
80607
Bacteroidota
GTA
Tyr
>WENV180468066
OBYJ01000323
80614
Bacteroidota
>WENV180467941
OBYJ01000122
95559
Bacteroidota
TAG
Leu
>WENV180467822
OBYJ01000037
338164
Bacteroidota
TTC
Glu
>WENV180467823
OBYJ01000037
338164
Bacteroidota
TTC
Glu
>WENV180467910
OBYJ01000099
95875
Bacteroidota
TAG
Leu
>WENV180467818
OBYJ01000035
338314
Bacteroidota
CCT
Arg
>WENV180468169
OBYJ01000742
240012
Bacteroidota
CCC
Gly
>WENV180467883
OBYJ01000080
44852
Bacteroidota
TAA
Leu
>WENV180467842
OBYJ01000049
147439
Bacteroidota
TCT
Arg
>WENV180467816
OBYJ01000029
411550
Bacteroidota
CTG
Gln
>WENV180467817
OBYJ01000029
411550
Bacteroidota
CTG
Gln
>WENV180467870
OBYJ01000071
338165
Bacteroidota
GGT
Thr
>WENV180468116
OBYJ01000479
19528
Bacteroidota
GGA
Ser
>WENV180467846
OBYJ01000051
50727
Bacteroidota
TGA
Ser
>WENV180468231
OBYJ01001316
425638
Bacteroidota
CTG
Gln
>WENV180467767
OBYJ01000003
19317
Bacteroidota
GGA
Ser
>WENV180467858
OBYJ01000060
185921
Bacteroidota
GTC
Asp
>WENV180467859
OBYJ01000060
185921
Bacteroidota
GTC
Asp
>WENV180467973
OBYJ01000158
23696
Bacteroidota
GCT
Ser
>WENV180467772
OBYJ01000007
56823
Bacteroidota
TGA
Ser
>WENV180467773
OBYJ01000007
56823
Bacteroidota
TGA
Ser
>WENV180468090
OBYJ01000376
56823
Bacteroidota
TGA
Ser
>WENV180468115
OBYJ01000479
56823
Bacteroidota
TGA
Ser
>WENV180468225
OBYJ01001221
56823
Bacteroidota
TGA
Ser
>WENV180467889
OBYJ01000085
16224
Bacteroidota
GGA
Ser
>WENV180468080
OBYJ01000345
16220
Bacteroidota
GGA
Ser
>WENV180467801
OBYJ01000023
338125
Bacteroidota
CCT
Arg
>WENV180468287
OBYJ01002408
338125
Bacteroidota
CCT
Arg
>WENV180467849
OBYJ01000053
235129
Bacteroidota
GCC
Gly
>WENV180468078
OBYJ01000337
235129
Bacteroidota
GCC
Gly
>WENV180468048
OBYJ01000246
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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