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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
52 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180470251
OBYN01000004
235097
Bacteroidota
TTT
Lys
>WENV180470273
OBYN01000023
235097
Bacteroidota
TTT
Lys
>WENV180470352
OBYN01000130
235102
Bacteroidota
CGT
Thr
>WENV180470403
OBYN01000387
144657
Bacteroidota
CGG
Pro
>WENV180470406
OBYN01000417
338155
Bacteroidota
CTC
Glu
>WENV180470404
OBYN01000388
339341
Bacteroidota
GGT
Thr
>WENV180470409
OBYN01000439
338486
Bacteroidota
CAT
Met
>WENV180470258
OBYN01000008
436206
Bacteroidota
TTG
Gln
>WENV180470393
OBYN01000351
436206
Bacteroidota
TTG
Gln
>WENV180470396
OBYN01000355
20893
Bacteroidota
GGA
Ser
>WENV180470271
OBYN01000019
338124
Bacteroidota
CCG
Arg
>WENV180470301
OBYN01000044
338132
Bacteroidota
GCA
Cys
>WENV180470364
OBYN01000175
338132
Bacteroidota
GCA
Cys
>WENV180470368
OBYN01000177
338132
Bacteroidota
GCA
Cys
>WENV180470378
OBYN01000222
104003
Bacteroidota
TAG
Leu
>WENV180470244
OBYN01000003
193809
Bacteroidota
CAT
Met
>WENV180470407
OBYN01000422
58714
Bacteroidota
CAA
Leu
>WENV180470299
OBYN01000041
301449
Bacteroidota
CGG
Pro
>WENV180470279
OBYN01000032
144656
Bacteroidota
GTG
His
>WENV180470375
OBYN01000213
235207
Bacteroidota
CAT
Met
>WENV180470354
OBYN01000132
235180
Bacteroidota
CCA
Trp
>WENV180470270
OBYN01000018
144596
Bacteroidota
GGC
Ala
>WENV180470249
OBYN01000004
80607
Bacteroidota
GTA
Tyr
>WENV180470295
OBYN01000041
80607
Bacteroidota
GTA
Tyr
>WENV180470318
OBYN01000070
113604
Bacteroidota
>WENV180470321
OBYN01000070
113604
Bacteroidota
>WENV180470463
OBYN01009571
144590
Bacteroidota
GTT
Asn
>WENV180470246
OBYN01000003
95559
Bacteroidota
TAG
Leu
>WENV180470267
OBYN01000014
419272
Bacteroidota
CTG
Gln
>WENV180470310
OBYN01000062
144655
Bacteroidota
GGC
Ala
>WENV180470266
OBYN01000014
139743
Bacteroidota
GGG
Pro
>WENV180470241
OBYN01000001
44852
Bacteroidota
TAA
Leu
>WENV180470285
OBYN01000036
147439
Bacteroidota
TCT
Arg
>WENV180470326
OBYN01000074
354570
Bacteroidota
TTC
Glu
>WENV180470327
OBYN01000074
354570
Bacteroidota
TTC
Glu
>WENV180470461
OBYN01009493
338165
Bacteroidota
GGT
Thr
>WENV180470256
OBYN01000007
425638
Bacteroidota
CTG
Gln
>WENV180470370
OBYN01000184
425638
Bacteroidota
CTG
Gln
>WENV180470283
OBYN01000036
185921
Bacteroidota
GTC
Asp
>WENV180470284
OBYN01000036
185921
Bacteroidota
GTC
Asp
>WENV180470391
OBYN01000318
185921
Bacteroidota
GTC
Asp
>WENV180470394
OBYN01000354
23696
Bacteroidota
GCT
Ser
>WENV180470243
OBYN01000002
55270
Bacteroidota
TGA
Ser
>WENV180470277
OBYN01000031
55270
Bacteroidota
TGA
Ser
>WENV180470303
OBYN01000046
55270
Bacteroidota
TGA
Ser
>WENV180470371
OBYN01000199
55270
Bacteroidota
TGA
Ser
>WENV180470343
OBYN01000113
16224
Bacteroidota
GGA
Ser
>WENV180470268
OBYN01000014
16220
Bacteroidota
GGA
Ser
>WENV180470239
OBYN01000001
338125
Bacteroidota
CCT
Arg
>WENV180470272
OBYN01000020
338125
Bacteroidota
CCT
Arg
>WENV180470382
OBYN01000271
235129
Bacteroidota
GCC
Gly
>WENV180470397
OBYN01000357
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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