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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180472979
OBYQ01015173
235146
Actinomycetota
CGT
Thr
>WENV180473087
OBYQ01035823
235347
Actinomycetota
GGC
Ala
>WENV180472349
OBYQ01000260
144589
Actinomycetota
ACG
Arg
>WENV180472350
OBYQ01000260
144589
Actinomycetota
ACG
Arg
>WENV180472510
OBYQ01000481
37070
Actinomycetota
CGA
Ser
>WENV180473061
OBYQ01028833
144600
Actinomycetota
TGG
Pro
>WENV180472480
OBYQ01000432
235092
Actinomycetota
CCG
Arg
>WENV180472909
OBYQ01005226
411601
Actinomycetota
CCC
Gly
>WENV180472215
OBYQ01000123
235174
Actinomycetota
TGC
Ala
>WENV180472251
OBYQ01000161
235101
Actinomycetota
TTT
Lys
>WENV180472357
OBYQ01000277
145423
Actinomycetota
TCT
Arg
>WENV180472950
OBYQ01009101
44862
Actinomycetota
CGA
Ser
>WENV180472446
OBYQ01000379
44942
Actinomycetota
TGA
Ser
>WENV180472528
OBYQ01000506
238473
Actinomycetota
GTG
His
>WENV180472096
OBYQ01000052
338148
Actinomycetota
CTG
Gln
>WENV180472079
OBYQ01000031
235148
Actinomycetota
GTT
Asn
>WENV180472080
OBYQ01000031
235148
Actinomycetota
GTT
Asn
>WENV180472082
OBYQ01000031
235148
Actinomycetota
GTT
Asn
>WENV180473142
OBYQ01062895
144825
Actinomycetota
CAT
Met
>WENV180472607
OBYQ01000802
145347
Actinomycetota
CAA
Leu
>WENV180472741
OBYQ01001463
16467
Actinomycetota
GCT
Ser
>WENV180472218
OBYQ01000123
411554
Actinomycetota
CCC
Gly
>WENV180472098
OBYQ01000052
113601
Actinomycetota
TAG
Leu
>WENV180472226
OBYQ01000126
145343
Actinomycetota
GGG
Pro
>WENV180472314
OBYQ01000206
235149
Actinomycetota
CCT
Arg
>WENV180473115
OBYQ01046878
240009
Actinomycetota
GGC
Ala
>WENV180472411
OBYQ01000346
145269
Actinomycetota
CAT
Met
>WENV180472097
OBYQ01000052
235121
Actinomycetota
CGT
Thr
>WENV180472078
OBYQ01000031
144635
Actinomycetota
TGG
Pro
>WENV180472566
OBYQ01000621
119485
Actinomycetota
TAA
Leu
>WENV180473129
OBYQ01053247
17009
Actinomycetota
GAG
Leu
>WENV180472213
OBYQ01000123
80622
Actinomycetota
CAG
Leu
>WENV180472613
OBYQ01000822
147734
Actinomycetota
GTC
Asp
>WENV180472615
OBYQ01000822
147734
Actinomycetota
GTC
Asp
>WENV180473173
OBYQ01098739
147734
Actinomycetota
GTC
Asp
>WENV180472081
OBYQ01000031
235173
Actinomycetota
GGC
Ala
>WENV180472216
OBYQ01000123
235173
Actinomycetota
GGC
Ala
>WENV180472439
OBYQ01000370
95593
Actinomycetota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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