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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
76 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180478668
OBZC01000128
235097
Bacteroidota
TTT
Lys
>WENV180478806
OBZC01000258
235097
Bacteroidota
TTT
Lys
>WENV180479389
OBZC01002291
235102
Bacteroidota
CGT
Thr
>WENV180479642
OBZC01009482
144657
Bacteroidota
CGG
Pro
>WENV180478799
OBZC01000255
126966
Bacteroidota
TAC
Val
>WENV180478496
OBZC01000007
338155
Bacteroidota
CTC
Glu
>WENV180478542
OBZC01000032
338155
Bacteroidota
CTC
Glu
>WENV180479057
OBZC01000785
343138
Bacteroidota
CCT
Arg
>WENV180479318
OBZC01001693
58715
Bacteroidota
GAG
Leu
>WENV180479304
OBZC01001634
338486
Bacteroidota
CAT
Met
>WENV180478544
OBZC01000034
415410
Bacteroidota
TTG
Gln
>WENV180478774
OBZC01000231
415410
Bacteroidota
TTG
Gln
>WENV180479317
OBZC01001693
59689
Bacteroidota
CAG
Leu
>WENV180479331
OBZC01001786
59689
Bacteroidota
CAG
Leu
>WENV180479271
OBZC01001412
20893
Bacteroidota
GGA
Ser
>WENV180479369
OBZC01002106
20893
Bacteroidota
GGA
Ser
>WENV180478525
OBZC01000021
338124
Bacteroidota
CCG
Arg
>WENV180478935
OBZC01000527
235203
Bacteroidota
TTT
Lys
>WENV180479430
OBZC01002652
235203
Bacteroidota
TTT
Lys
>WENV180479463
OBZC01003188
238121
Bacteroidota
CTT
Lys
>WENV180478800
OBZC01000255
126641
Bacteroidota
TAC
Val
>WENV180478550
OBZC01000038
338132
Bacteroidota
GCA
Cys
>WENV180478565
OBZC01000044
338132
Bacteroidota
GCA
Cys
>WENV180478621
OBZC01000084
338132
Bacteroidota
GCA
Cys
>WENV180479464
OBZC01003188
45423
Bacteroidota
TGA
Ser
>WENV180479070
OBZC01000821
193809
Bacteroidota
CAT
Met
>WENV180478964
OBZC01000560
58714
Bacteroidota
CAA
Leu
>WENV180478479
OBZC01000002
301449
Bacteroidota
CGG
Pro
>WENV180478610
OBZC01000076
301449
Bacteroidota
CGG
Pro
>WENV180479259
OBZC01001364
301449
Bacteroidota
CGG
Pro
>WENV180479269
OBZC01001409
301449
Bacteroidota
CGG
Pro
>WENV180478640
OBZC01000117
144933
Bacteroidota
TCT
Arg
>WENV180479426
OBZC01002633
144933
Bacteroidota
TCT
Arg
>WENV180478574
OBZC01000049
144656
Bacteroidota
GTG
His
>WENV180478831
OBZC01000296
235207
Bacteroidota
CAT
Met
>WENV180479367
OBZC01002073
144659
Bacteroidota
GTG
His
>WENV180479368
OBZC01002073
144659
Bacteroidota
GTG
His
>WENV180479895
OBZC01075305
235180
Bacteroidota
CCA
Trp
>WENV180478578
OBZC01000052
80607
Bacteroidota
GTA
Tyr
>WENV180478616
OBZC01000079
80607
Bacteroidota
GTA
Tyr
>WENV180478804
OBZC01000257
80607
Bacteroidota
GTA
Tyr
>WENV180479123
OBZC01000896
80607
Bacteroidota
GTA
Tyr
>WENV180479142
OBZC01000950
80607
Bacteroidota
GTA
Tyr
>WENV180478735
OBZC01000181
16999
Bacteroidota
GGA
Ser
>WENV180478573
OBZC01000049
52358
Bacteroidota
TGA
Ser
>WENV180478736
OBZC01000182
52358
Bacteroidota
TGA
Ser
>WENV180479112
OBZC01000868
52358
Bacteroidota
TGA
Ser
>WENV180479589
OBZC01006413
52358
Bacteroidota
TGA
Ser
>WENV180479890
OBZC01073930
52358
Bacteroidota
TGA
Ser
>WENV180478581
OBZC01000052
144590
Bacteroidota
GTT
Asn
>WENV180478582
OBZC01000052
144590
Bacteroidota
GTT
Asn
>WENV180479125
OBZC01000912
95559
Bacteroidota
TAG
Leu
>WENV180478696
OBZC01000145
419272
Bacteroidota
CTG
Gln
>WENV180478612
OBZC01000078
144655
Bacteroidota
GGC
Ala
>WENV180479055
OBZC01000785
338164
Bacteroidota
TTC
Glu
>WENV180479056
OBZC01000785
338164
Bacteroidota
TTC
Glu
>WENV180478882
OBZC01000433
95875
Bacteroidota
TAG
Leu
>WENV180478538
OBZC01000029
44852
Bacteroidota
TAA
Leu
>WENV180479401
OBZC01002364
147439
Bacteroidota
TCT
Arg
>WENV180479479
OBZC01003439
411550
Bacteroidota
CTG
Gln
>WENV180478579
OBZC01000052
338165
Bacteroidota
GGT
Thr
>WENV180478805
OBZC01000257
338165
Bacteroidota
GGT
Thr
>WENV180478809
OBZC01000266
19528
Bacteroidota
GGA
Ser
>WENV180478695
OBZC01000145
132360
Bacteroidota
GGG
Pro
>WENV180479235
OBZC01001274
132360
Bacteroidota
GGG
Pro
>WENV180478493
OBZC01000006
425638
Bacteroidota
CTG
Gln
>WENV180478598
OBZC01000065
425638
Bacteroidota
CTG
Gln
>WENV180479068
OBZC01000810
425638
Bacteroidota
CTG
Gln
>WENV180478548
OBZC01000036
185921
Bacteroidota
GTC
Asp
>WENV180479186
OBZC01001104
16220
Bacteroidota
GGA
Ser
>WENV180478539
OBZC01000029
338125
Bacteroidota
CCT
Arg
>WENV180479131
OBZC01000918
338125
Bacteroidota
CCT
Arg
>WENV180479167
OBZC01001014
235129
Bacteroidota
GCC
Gly
>WENV180479316
OBZC01001693
235129
Bacteroidota
GCC
Gly
>WENV180479601
OBZC01006837
235129
Bacteroidota
GCC
Gly
>WENV180479313
OBZC01001686
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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