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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180487477
OBZP01000260
235146
Actinomycetota
CGT
Thr
>WENV180487540
OBZP01001047
235347
Actinomycetota
GGC
Ala
>WENV180487541
OBZP01001047
235347
Actinomycetota
GGC
Ala
>WENV180487446
OBZP01000129
201717
Actinomycetota
CTT
Lys
>WENV180487524
OBZP01000759
235194
Actinomycetota
GTG
His
>WENV180487509
OBZP01000642
158720
Actinomycetota
ACG
Arg
>WENV180487510
OBZP01000642
158720
Actinomycetota
ACG
Arg
>WENV180487478
OBZP01000274
411601
Actinomycetota
CCC
Gly
>WENV180487527
OBZP01000852
144826
Actinomycetota
GGG
Pro
>WENV180487497
OBZP01000509
23370
Actinomycetota
GCT
Ser
>WENV180487554
OBZP01001461
174149
Actinomycetota
GAT
Ile
>WENV180487543
OBZP01001151
338239
Actinomycetota
TTC
Glu
>WENV180487577
OBZP01002773
338239
Actinomycetota
TTC
Glu
>WENV180487555
OBZP01001461
235174
Actinomycetota
TGC
Ala
>WENV180487447
OBZP01000134
121510
Actinomycetota
TAA
Leu
>WENV180487517
OBZP01000689
356045
Actinomycetota
GAC
Val
>WENV180487578
OBZP01002910
145345
Actinomycetota
TAC
Val
>WENV180487518
OBZP01000689
235199
Actinomycetota
CAC
Val
>WENV180487490
OBZP01000347
44862
Actinomycetota
CGA
Ser
>WENV180487475
OBZP01000260
313386
Actinomycetota
CGT
Thr
>WENV180487522
OBZP01000718
413665
Actinomycetota
TTG
Gln
>WENV180487474
OBZP01000258
254857
Actinomycetota
CCG
Arg
>WENV180487602
OBZP01009026
144700
Actinomycetota
CAT
Met
>WENV180487491
OBZP01000351
295695
Actinomycetota
CTC
Glu
>WENV180487492
OBZP01000351
338148
Actinomycetota
CTG
Gln
>WENV180487548
OBZP01001400
53078
Actinomycetota
GGA
Ser
>WENV180487519
OBZP01000690
144825
Actinomycetota
CAT
Met
>WENV180487523
OBZP01000737
235348
Actinomycetota
CCT
Arg
>WENV180487570
OBZP01002007
237794
Actinomycetota
CCG
Arg
>WENV180487476
OBZP01000260
113601
Actinomycetota
TAG
Leu
>WENV180487526
OBZP01000805
144595
Actinomycetota
CAA
Leu
>WENV180487576
OBZP01002562
51286
Actinomycetota
TGA
Ser
>WENV180487545
OBZP01001192
80622
Actinomycetota
CAG
Leu
>WENV180487486
OBZP01000298
16222
Actinomycetota
GAG
Leu
>WENV180487529
OBZP01000932
243162
Actinomycetota
GTT
Asn
>WENV180487511
OBZP01000647
144660
Actinomycetota
TAC
Val
>WENV180487521
OBZP01000709
95593
Actinomycetota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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