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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180488161
OBZQ01002363
235146
Actinomycetota
CGT
Thr
>WENV180488299
OBZQ01008027
235347
Actinomycetota
GGC
Ala
>WENV180487759
OBZQ01000105
144589
Actinomycetota
ACG
Arg
>WENV180487760
OBZQ01000105
144589
Actinomycetota
ACG
Arg
>WENV180488042
OBZQ01000828
37070
Actinomycetota
CGA
Ser
>WENV180488209
OBZQ01003649
144600
Actinomycetota
TGG
Pro
>WENV180488274
OBZQ01006004
235194
Actinomycetota
GTG
His
>WENV180488173
OBZQ01002680
411601
Actinomycetota
CCC
Gly
>WENV180488226
OBZQ01004295
23370
Actinomycetota
GCT
Ser
>WENV180488145
OBZQ01001801
235174
Actinomycetota
TGC
Ala
>WENV180487668
OBZQ01000029
235101
Actinomycetota
TTT
Lys
>WENV180488416
OBZQ01030038
121510
Actinomycetota
TAA
Leu
>WENV180488338
OBZQ01014359
44855
Actinomycetota
TGA
Ser
>WENV180488337
OBZQ01014264
235199
Actinomycetota
CAC
Val
>WENV180488111
OBZQ01001314
44862
Actinomycetota
CGA
Ser
>WENV180488060
OBZQ01001019
198659
Actinomycetota
TAC
Val
>WENV180487830
OBZQ01000178
254857
Actinomycetota
CCG
Arg
>WENV180487986
OBZQ01000554
44942
Actinomycetota
TGA
Ser
>WENV180487841
OBZQ01000207
98279
Actinomycetota
GTA
Tyr
>WENV180487896
OBZQ01000308
338148
Actinomycetota
CTG
Gln
>WENV180487915
OBZQ01000333
235148
Actinomycetota
GTT
Asn
>WENV180487916
OBZQ01000333
235148
Actinomycetota
GTT
Asn
>WENV180487956
OBZQ01000402
235148
Actinomycetota
GTT
Asn
>WENV180487740
OBZQ01000091
176456
Actinomycetota
TCT
Arg
>WENV180488139
OBZQ01001687
144825
Actinomycetota
CAT
Met
>WENV180487911
OBZQ01000326
145347
Actinomycetota
CAA
Leu
>WENV180488122
OBZQ01001478
235348
Actinomycetota
CCT
Arg
>WENV180487840
OBZQ01000207
16467
Actinomycetota
GCT
Ser
>WENV180488026
OBZQ01000713
411554
Actinomycetota
CCC
Gly
>WENV180487884
OBZQ01000279
113601
Actinomycetota
TAG
Leu
>WENV180488232
OBZQ01004455
144595
Actinomycetota
CAA
Leu
>WENV180487719
OBZQ01000075
235149
Actinomycetota
CCT
Arg
>WENV180488093
OBZQ01001198
91808
Actinomycetota
CAG
Leu
>WENV180488000
OBZQ01000604
145269
Actinomycetota
CAT
Met
>WENV180487883
OBZQ01000279
235121
Actinomycetota
CGT
Thr
>WENV180488227
OBZQ01004297
393408
Actinomycetota
TTC
Glu
>WENV180487962
OBZQ01000425
47164
Actinomycetota
GGA
Ser
>WENV180487912
OBZQ01000326
144635
Actinomycetota
TGG
Pro
>WENV180487871
OBZQ01000256
119485
Actinomycetota
TAA
Leu
>WENV180488329
OBZQ01012343
17009
Actinomycetota
GAG
Leu
>WENV180487955
OBZQ01000402
235173
Actinomycetota
GGC
Ala
>WENV180488219
OBZQ01004067
235173
Actinomycetota
GGC
Ala
>WENV180488183
OBZQ01002867
243162
Actinomycetota
GTT
Asn
>WENV180487736
OBZQ01000091
278447
Actinomycetota
GTG
His
>WENV180488149
OBZQ01002016
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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