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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180493227
OBZY01002250
235097
Bacteroidota
TTT
Lys
>WENV180493185
OBZY01000808
235102
Bacteroidota
CGT
Thr
>WENV180493328
OBZY01013411
338155
Bacteroidota
CTC
Glu
>WENV180493177
OBZY01000712
95618
Bacteroidota
TAG
Leu
>WENV180493241
OBZY01002779
235203
Bacteroidota
TTT
Lys
>WENV180493260
OBZY01004351
338132
Bacteroidota
GCA
Cys
>WENV180493224
OBZY01002037
144688
Bacteroidota
CAT
Met
>WENV180493213
OBZY01001770
80607
Bacteroidota
GTA
Tyr
>WENV180493245
OBZY01002859
80607
Bacteroidota
GTA
Tyr
>WENV180493257
OBZY01004326
113604
Bacteroidota
>WENV180493194
OBZY01001041
95559
Bacteroidota
TAG
Leu
>WENV180493263
OBZY01004813
144655
Bacteroidota
GGC
Ala
>WENV180493184
OBZY01000806
16224
Bacteroidota
GGA
Ser
>WENV180493399
OBZY01028987
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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