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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180496965
OCAE01000045
144657
Bacteroidota
CGG
Pro
>WENV180496894
OCAE01000008
339341
Bacteroidota
GGT
Thr
>WENV180497030
OCAE01000097
343138
Bacteroidota
CCT
Arg
>WENV180496908
OCAE01000017
58715
Bacteroidota
GAG
Leu
>WENV180496923
OCAE01000028
46165
Bacteroidota
TGA
Ser
>WENV180496901
OCAE01000014
338486
Bacteroidota
CAT
Met
>WENV180497024
OCAE01000093
338486
Bacteroidota
CAT
Met
>WENV180496907
OCAE01000017
59689
Bacteroidota
CAG
Leu
>WENV180496968
OCAE01000045
59689
Bacteroidota
CAG
Leu
>WENV180496904
OCAE01000015
235203
Bacteroidota
TTT
Lys
>WENV180497108
OCAE01000205
235203
Bacteroidota
TTT
Lys
>WENV180496920
OCAE01000028
238121
Bacteroidota
CTT
Lys
>WENV180496921
OCAE01000028
238121
Bacteroidota
CTT
Lys
>WENV180496946
OCAE01000039
338132
Bacteroidota
GCA
Cys
>WENV180496922
OCAE01000028
45423
Bacteroidota
TGA
Ser
>WENV180496903
OCAE01000015
58714
Bacteroidota
CAA
Leu
>WENV180497139
OCAE01000277
144659
Bacteroidota
GTG
His
>WENV180497140
OCAE01000277
144659
Bacteroidota
GTG
His
>WENV180496966
OCAE01000045
235180
Bacteroidota
CCA
Trp
>WENV180496893
OCAE01000008
80614
Bacteroidota
>WENV180496984
OCAE01000064
80614
Bacteroidota
>WENV180497132
OCAE01000268
80614
Bacteroidota
>WENV180497028
OCAE01000097
338164
Bacteroidota
TTC
Glu
>WENV180497029
OCAE01000097
338164
Bacteroidota
TTC
Glu
>WENV180496902
OCAE01000015
95875
Bacteroidota
TAG
Leu
>WENV180496912
OCAE01000020
240012
Bacteroidota
CCC
Gly
>WENV180496913
OCAE01000020
147439
Bacteroidota
TCT
Arg
>WENV180496944
OCAE01000039
411550
Bacteroidota
CTG
Gln
>WENV180496945
OCAE01000039
411550
Bacteroidota
CTG
Gln
>WENV180497161
OCAE01000299
23696
Bacteroidota
GCT
Ser
>WENV180496906
OCAE01000017
235129
Bacteroidota
GCC
Gly
>WENV180497050
OCAE01000122
235129
Bacteroidota
GCC
Gly
>WENV180497052
OCAE01000122
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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