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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
58 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180520545
OCHE01129169
235146
Actinomycetota
CGT
Thr
>WENV180519636
OCHE01002560
119475
Actinomycetota
TAA
Leu
>WENV180519518
OCHE01001637
235153
Actinomycetota
CCT
Arg
>WENV180520459
OCHE01076510
144589
Actinomycetota
ACG
Arg
>WENV180519734
OCHE01003878
37070
Actinomycetota
CGA
Ser
>WENV180520062
OCHE01011649
37070
Actinomycetota
CGA
Ser
>WENV180520405
OCHE01060206
144600
Actinomycetota
TGG
Pro
>WENV180519759
OCHE01004100
235092
Actinomycetota
CCG
Arg
>WENV180520298
OCHE01035402
235194
Actinomycetota
GTG
His
>WENV180520067
OCHE01011757
245301
Actinomycetota
GCC
Gly
>WENV180520232
OCHE01026827
245301
Actinomycetota
GCC
Gly
>WENV180520235
OCHE01027111
411601
Actinomycetota
CCC
Gly
>WENV180519675
OCHE01002854
16219
Actinomycetota
GCT
Ser
>WENV180519792
OCHE01004650
235174
Actinomycetota
TGC
Ala
>WENV180519937
OCHE01007556
235174
Actinomycetota
TGC
Ala
>WENV180520051
OCHE01010842
235174
Actinomycetota
TGC
Ala
>WENV180519353
OCHE01000936
235101
Actinomycetota
TTT
Lys
>WENV180519946
OCHE01007698
144625
Actinomycetota
GTC
Asp
>WENV180520016
OCHE01009286
144625
Actinomycetota
GTC
Asp
>WENV180520123
OCHE01014789
145423
Actinomycetota
TCT
Arg
>WENV180519703
OCHE01003222
153948
Actinomycetota
GGG
Pro
>WENV180520303
OCHE01035926
44855
Actinomycetota
TGA
Ser
>WENV180520162
OCHE01018283
235199
Actinomycetota
CAC
Val
>WENV180519783
OCHE01004463
44862
Actinomycetota
CGA
Ser
>WENV180520057
OCHE01011216
198659
Actinomycetota
TAC
Val
>WENV180519697
OCHE01003142
254857
Actinomycetota
CCG
Arg
>WENV180519856
OCHE01005883
16223
Actinomycetota
GAG
Leu
>WENV180519688
OCHE01003002
144593
Actinomycetota
TAT
Ile
>WENV180519655
OCHE01002728
144636
Actinomycetota
GAT
Ile
>WENV180519657
OCHE01002728
144636
Actinomycetota
GAT
Ile
>WENV180520236
OCHE01027324
98279
Actinomycetota
GTA
Tyr
>WENV180519942
OCHE01007593
338148
Actinomycetota
CTG
Gln
>WENV180519983
OCHE01008367
338148
Actinomycetota
CTG
Gln
>WENV180519900
OCHE01006587
235148
Actinomycetota
GTT
Asn
>WENV180520052
OCHE01010965
53078
Actinomycetota
GGA
Ser
>WENV180520267
OCHE01029735
176456
Actinomycetota
TCT
Arg
>WENV180520027
OCHE01009664
144825
Actinomycetota
CAT
Met
>WENV180520599
OCHE01169463
338139
Actinomycetota
GTT
Asn
>WENV180519817
OCHE01005022
411554
Actinomycetota
CCC
Gly
>WENV180519924
OCHE01007310
411554
Actinomycetota
CCC
Gly
>WENV180519651
OCHE01002708
113601
Actinomycetota
TAG
Leu
>WENV180519858
OCHE01005933
144595
Actinomycetota
CAA
Leu
>WENV180520090
OCHE01012254
145343
Actinomycetota
GGG
Pro
>WENV180519348
OCHE01000913
235149
Actinomycetota
CCT
Arg
>WENV180520112
OCHE01013488
414234
Actinomycetota
CTG
Gln
>WENV180520174
OCHE01019195
145269
Actinomycetota
CAT
Met
>WENV180519650
OCHE01002708
235121
Actinomycetota
CGT
Thr
>WENV180519517
OCHE01001635
144635
Actinomycetota
TGG
Pro
>WENV180519547
OCHE01001819
61501
Actinomycetota
CAG
Leu
>WENV180519967
OCHE01008010
119485
Actinomycetota
TAA
Leu
>WENV180520056
OCHE01011108
80622
Actinomycetota
CAG
Leu
>WENV180519633
OCHE01002552
44851
Actinomycetota
TGA
Ser
>WENV180519662
OCHE01002775
158513
Actinomycetota
TGG
Pro
>WENV180519793
OCHE01004650
235173
Actinomycetota
GGC
Ala
>WENV180519938
OCHE01007556
235173
Actinomycetota
GGC
Ala
>WENV180520049
OCHE01010613
278447
Actinomycetota
GTG
His
>WENV180520333
OCHE01041520
95593
Actinomycetota
>WENV180520468
OCHE01079317
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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