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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
132 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180525284
OCHI01000128
235097
Bacteroidota
TTT
Lys
>WENV180526296
OCHI01011913
235097
Bacteroidota
TTT
Lys
>WENV180526440
OCHI01020030
235097
Bacteroidota
TTT
Lys
>WENV180526805
OCHI01075656
235102
Bacteroidota
CGT
Thr
>WENV180525069
OCHI01000016
267954
Bacteroidota
GCC
Gly
>WENV180525221
OCHI01000086
267954
Bacteroidota
GCC
Gly
>WENV180525668
OCHI01000980
144657
Bacteroidota
CGG
Pro
>WENV180526015
OCHI01003961
144657
Bacteroidota
CGG
Pro
>WENV180525755
OCHI01001311
243025
Bacteroidota
CAT
Met
>WENV180525854
OCHI01002219
243025
Bacteroidota
CAT
Met
>WENV180525883
OCHI01002414
338155
Bacteroidota
CTC
Glu
>WENV180526160
OCHI01006852
153993
Bacteroidota
GAT
Ile
>WENV180526825
OCHI01081303
339341
Bacteroidota
GGT
Thr
>WENV180525179
OCHI01000061
343138
Bacteroidota
CCT
Arg
>WENV180525045
OCHI01000007
58715
Bacteroidota
GAG
Leu
>WENV180526196
OCHI01007821
58715
Bacteroidota
GAG
Leu
>WENV180525138
OCHI01000050
46165
Bacteroidota
TGA
Ser
>WENV180526682
OCHI01047872
95618
Bacteroidota
TAG
Leu
>WENV180525243
OCHI01000103
338486
Bacteroidota
CAT
Met
>WENV180525374
OCHI01000219
338486
Bacteroidota
CAT
Met
>WENV180525744
OCHI01001242
338486
Bacteroidota
CAT
Met
>WENV180525745
OCHI01001242
338486
Bacteroidota
CAT
Met
>WENV180525787
OCHI01001514
415410
Bacteroidota
TTG
Gln
>WENV180525357
OCHI01000204
415410
Bacteroidota
TTG
Gln
>WENV180525084
OCHI01000022
415410
Bacteroidota
TTG
Gln
>WENV180525044
OCHI01000007
59689
Bacteroidota
CAG
Leu
>WENV180525251
OCHI01000107
59689
Bacteroidota
CAG
Leu
>WENV180526780
OCHI01066466
188343
Bacteroidota
TGC
Ala
>WENV180525134
OCHI01000048
155123
Bacteroidota
GTT
Asn
>WENV180525135
OCHI01000048
155123
Bacteroidota
GTT
Asn
>WENV180526720
OCHI01056423
344692
Bacteroidota
GGT
Thr
>WENV180526115
OCHI01005406
341950
Bacteroidota
>WENV180525177
OCHI01000060
338124
Bacteroidota
CCG
Arg
>WENV180525832
OCHI01001971
235203
Bacteroidota
TTT
Lys
>WENV180525139
OCHI01000050
238121
Bacteroidota
CTT
Lys
>WENV180525140
OCHI01000050
238121
Bacteroidota
CTT
Lys
>WENV180525825
OCHI01001798
238121
Bacteroidota
CTT
Lys
>WENV180525826
OCHI01001798
238121
Bacteroidota
CTT
Lys
>WENV180525222
OCHI01000087
126641
Bacteroidota
TAC
Val
>WENV180525356
OCHI01000198
126641
Bacteroidota
TAC
Val
>WENV180525519
OCHI01000457
126641
Bacteroidota
TAC
Val
>WENV180525520
OCHI01000457
126641
Bacteroidota
TAC
Val
>WENV180525268
OCHI01000118
338132
Bacteroidota
GCA
Cys
>WENV180525503
OCHI01000422
338132
Bacteroidota
GCA
Cys
>WENV180525642
OCHI01000804
338132
Bacteroidota
GCA
Cys
>WENV180525844
OCHI01002114
338132
Bacteroidota
GCA
Cys
>WENV180525923
OCHI01002699
338132
Bacteroidota
GCA
Cys
>WENV180526753
OCHI01062820
144688
Bacteroidota
CAT
Met
>WENV180525141
OCHI01000050
45423
Bacteroidota
TGA
Ser
>WENV180525342
OCHI01000175
58714
Bacteroidota
CAA
Leu
>WENV180525746
OCHI01001246
280660
Bacteroidota
CCA
Trp
>WENV180525673
OCHI01000997
144933
Bacteroidota
TCT
Arg
>WENV180526039
OCHI01004349
144933
Bacteroidota
TCT
Arg
>WENV180525547
OCHI01000528
144656
Bacteroidota
GTG
His
>WENV180525314
OCHI01000149
235207
Bacteroidota
CAT
Met
>WENV180525422
OCHI01000284
144659
Bacteroidota
GTG
His
>WENV180525423
OCHI01000284
144659
Bacteroidota
GTG
His
>WENV180525253
OCHI01000107
235180
Bacteroidota
CCA
Trp
>WENV180525456
OCHI01000328
144596
Bacteroidota
GGC
Ala
>WENV180525473
OCHI01000368
80607
Bacteroidota
GTA
Tyr
>WENV180525535
OCHI01000497
80607
Bacteroidota
GTA
Tyr
>WENV180525847
OCHI01002166
80607
Bacteroidota
GTA
Tyr
>WENV180526491
OCHI01025095
80607
Bacteroidota
GTA
Tyr
>WENV180526877
OCHI01092833
238553
Bacteroidota
GAA
Phe
>WENV180525385
OCHI01000230
80614
Bacteroidota
>WENV180525622
OCHI01000704
80614
Bacteroidota
>WENV180525639
OCHI01000778
80614
Bacteroidota
>WENV180526942
OCHI01115435
80614
Bacteroidota
>WENV180527062
OCHI01171875
80614
Bacteroidota
>WENV180527103
OCHI01208381
80614
Bacteroidota
>WENV180525780
OCHI01001469
154643
Bacteroidota
CAT
Met
>WENV180525467
OCHI01000348
144590
Bacteroidota
GTT
Asn
>WENV180525468
OCHI01000348
144590
Bacteroidota
GTT
Asn
>WENV180525358
OCHI01000206
95559
Bacteroidota
TAG
Leu
>WENV180525186
OCHI01000064
419272
Bacteroidota
CTG
Gln
>WENV180525170
OCHI01000056
144655
Bacteroidota
GGC
Ala
>WENV180525180
OCHI01000061
338164
Bacteroidota
TTC
Glu
>WENV180525181
OCHI01000061
338164
Bacteroidota
TTC
Glu
>WENV180525525
OCHI01000474
95875
Bacteroidota
TAG
Leu
>WENV180525897
OCHI01002542
95875
Bacteroidota
TAG
Leu
>WENV180525071
OCHI01000016
151121
Bacteroidota
CAT
Met
>WENV180526093
OCHI01005232
151121
Bacteroidota
CAT
Met
>WENV180525093
OCHI01000033
240012
Bacteroidota
CCC
Gly
>WENV180525979
OCHI01003394
280469
Bacteroidota
CGT
Thr
>WENV180525083
OCHI01000021
44852
Bacteroidota
TAA
Leu
>WENV180525094
OCHI01000033
147439
Bacteroidota
TCT
Arg
>WENV180525274
OCHI01000121
280513
Bacteroidota
TTT
Lys
>WENV180525531
OCHI01000492
280513
Bacteroidota
TTT
Lys
>WENV180526656
OCHI01043658
244299
Bacteroidota
CGG
Pro
>WENV180526569
OCHI01031466
150485
Bacteroidota
GTT
Asn
>WENV180525079
OCHI01000020
411550
Bacteroidota
CTG
Gln
>WENV180525346
OCHI01000187
338165
Bacteroidota
GGT
Thr
>WENV180525661
OCHI01000929
338165
Bacteroidota
GGT
Thr
>WENV180525362
OCHI01000212
50727
Bacteroidota
TGA
Ser
>WENV180525515
OCHI01000453
50727
Bacteroidota
TGA
Ser
>WENV180525778
OCHI01001467
50727
Bacteroidota
TGA
Ser
>WENV180525875
OCHI01002338
50727
Bacteroidota
TGA
Ser
>WENV180526040
OCHI01004388
50727
Bacteroidota
TGA
Ser
>WENV180525188
OCHI01000064
132360
Bacteroidota
GGG
Pro
>WENV180525904
OCHI01002562
132360
Bacteroidota
GGG
Pro
>WENV180526446
OCHI01020422
132360
Bacteroidota
GGG
Pro
>WENV180525041
OCHI01000006
425638
Bacteroidota
CTG
Gln
>WENV180525761
OCHI01001330
425638
Bacteroidota
CTG
Gln
>WENV180525836
OCHI01002007
425638
Bacteroidota
CTG
Gln
>WENV180526309
OCHI01012352
425638
Bacteroidota
CTG
Gln
>WENV180525621
OCHI01000702
239647
Bacteroidota
TTT
Lys
>WENV180525931
OCHI01002819
239647
Bacteroidota
TTT
Lys
>WENV180526239
OCHI01009055
239647
Bacteroidota
TTT
Lys
>WENV180526041
OCHI01004388
19317
Bacteroidota
GGA
Ser
>WENV180525728
OCHI01001183
353927
Bacteroidota
TTC
Glu
>WENV180526743
OCHI01060956
353927
Bacteroidota
TTC
Glu
>WENV180525077
OCHI01000020
185921
Bacteroidota
GTC
Asp
>WENV180525078
OCHI01000020
185921
Bacteroidota
GTC
Asp
>WENV180525505
OCHI01000422
23696
Bacteroidota
GCT
Ser
>WENV180526473
OCHI01023826
414426
Bacteroidota
CTG
Gln
>WENV180526072
OCHI01004645
414426
Bacteroidota
CTG
Gln
>WENV180526357
OCHI01014484
414426
Bacteroidota
CTG
Gln
>WENV180525201
OCHI01000073
59498
Bacteroidota
GAG
Leu
>WENV180526001
OCHI01003761
59498
Bacteroidota
GAG
Leu
>WENV180525967
OCHI01003281
413953
Bacteroidota
GCA
Cys
>WENV180526205
OCHI01008202
48914
Bacteroidota
TGA
Ser
>WENV180525822
OCHI01001761
16224
Bacteroidota
GGA
Ser
>WENV180526028
OCHI01004204
151960
Bacteroidota
GGC
Ala
>WENV180525187
OCHI01000064
16220
Bacteroidota
GGA
Ser
>WENV180525081
OCHI01000021
338125
Bacteroidota
CCT
Arg
>WENV180525956
OCHI01003107
338125
Bacteroidota
CCT
Arg
>WENV180525043
OCHI01000007
235129
Bacteroidota
GCC
Gly
>WENV180525551
OCHI01000539
235129
Bacteroidota
GCC
Gly
>WENV180525553
OCHI01000539
235129
Bacteroidota
GCC
Gly
>WENV180525932
OCHI01002859
235129
Bacteroidota
GCC
Gly
>WENV180525934
OCHI01002859
235129
Bacteroidota
GCC
Gly
>WENV180526200
OCHI01007950
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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