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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180544098
OCIP01001768
144657
Bacteroidota
CGG
Pro
>WENV180544018
OCIP01000136
243025
Bacteroidota
CAT
Met
>WENV180544213
OCIP01017770
339341
Bacteroidota
GGT
Thr
>WENV180544074
OCIP01000820
17323
Bacteroidota
GGA
Ser
>WENV180544218
OCIP01018469
338486
Bacteroidota
CAT
Met
>WENV180544113
OCIP01002437
20893
Bacteroidota
GGA
Ser
>WENV180544109
OCIP01002340
238121
Bacteroidota
CTT
Lys
>WENV180544110
OCIP01002340
238121
Bacteroidota
CTT
Lys
>WENV180544111
OCIP01002340
238121
Bacteroidota
CTT
Lys
>WENV180544075
OCIP01000857
126641
Bacteroidota
TAC
Val
>WENV180544138
OCIP01004308
338132
Bacteroidota
GCA
Cys
>WENV180544144
OCIP01004725
104003
Bacteroidota
TAG
Leu
>WENV180544112
OCIP01002340
45423
Bacteroidota
TGA
Ser
>WENV180544174
OCIP01009080
181746
Bacteroidota
GGC
Ala
>WENV180544099
OCIP01001804
235165
Bacteroidota
CCA
Trp
>WENV180544179
OCIP01009632
301449
Bacteroidota
CGG
Pro
>WENV180544107
OCIP01002210
144659
Bacteroidota
GTG
His
>WENV180544096
OCIP01001701
80607
Bacteroidota
GTA
Tyr
>WENV180544142
OCIP01004591
80614
Bacteroidota
>WENV180544044
OCIP01000370
52358
Bacteroidota
TGA
Ser
>WENV180544168
OCIP01008344
338164
Bacteroidota
TTC
Glu
>WENV180544257
OCIP01028527
95875
Bacteroidota
TAG
Leu
>WENV180544156
OCIP01006299
338165
Bacteroidota
GGT
Thr
>WENV180544160
OCIP01006831
338165
Bacteroidota
GGT
Thr
>WENV180544090
OCIP01001577
425638
Bacteroidota
CTG
Gln
>WENV180544277
OCIP01039423
19317
Bacteroidota
GGA
Ser
>WENV180544079
OCIP01001048
353927
Bacteroidota
TTC
Glu
>WENV180544085
OCIP01001246
23696
Bacteroidota
GCT
Ser
>WENV180543996
OCIP01000009
414426
Bacteroidota
CTG
Gln
>WENV180544146
OCIP01005351
338125
Bacteroidota
CCT
Arg
>WENV180544087
OCIP01001294
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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