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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180544538
OCIQ01027349
202812
Bacillota
CAT
Met
>WENV180544487
OCIQ01014221
148239
Bacillota
TCT
Arg
>WENV180544566
OCIQ01039484
235154
Bacillota
GTT
Asn
>WENV180544398
OCIQ01002597
59312
Bacillota
CAG
Leu
>WENV180544591
OCIQ01054902
173314
Bacillota
GAT
Ile
>WENV180544535
OCIQ01025644
144599
Bacillota
GTC
Asp
>WENV180544488
OCIQ01014221
144610
Bacillota
GTG
His
>WENV180544427
OCIQ01004507
300148
Bacillota
TAC
Val
>WENV180544571
OCIQ01042550
245386
Bacillota
CCA
Trp
>WENV180544482
OCIQ01013611
154711
Bacillota
TGG
Pro
>WENV180544428
OCIQ01004507
157838
Bacillota
GTC
Asp
>WENV180544434
OCIQ01005065
144583
Bacillota
ACG
Arg
>WENV180544590
OCIQ01054902
299139
Bacillota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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