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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180553899
OCJK01000493
235102
Bacteroidota
CGT
Thr
>WENV180553838
OCJK01000178
415410
Bacteroidota
TTG
Gln
>WENV180553748
OCJK01000036
338124
Bacteroidota
CCG
Arg
>WENV180553842
OCJK01000219
338132
Bacteroidota
GCA
Cys
>WENV180553914
OCJK01001440
193809
Bacteroidota
CAT
Met
>WENV180553696
OCJK01000014
301449
Bacteroidota
CGG
Pro
>WENV180553822
OCJK01000144
144656
Bacteroidota
GTG
His
>WENV180553784
OCJK01000079
235207
Bacteroidota
CAT
Met
>WENV180553693
OCJK01000014
80607
Bacteroidota
GTA
Tyr
>WENV180553759
OCJK01000049
80607
Bacteroidota
GTA
Tyr
>WENV180553832
OCJK01000155
113604
Bacteroidota
>WENV180553835
OCJK01000155
113604
Bacteroidota
>WENV180553920
OCJK01001527
52358
Bacteroidota
TGA
Ser
>WENV180553850
OCJK01000301
144590
Bacteroidota
GTT
Asn
>WENV180553851
OCJK01000301
144590
Bacteroidota
GTT
Asn
>WENV180553844
OCJK01000224
95559
Bacteroidota
TAG
Leu
>WENV180553814
OCJK01000121
419272
Bacteroidota
CTG
Gln
>WENV180553845
OCJK01000233
144655
Bacteroidota
GGC
Ala
>WENV180553690
OCJK01000013
44852
Bacteroidota
TAA
Leu
>WENV180553813
OCJK01000121
132360
Bacteroidota
GGG
Pro
>WENV180553852
OCJK01000316
16224
Bacteroidota
GGA
Ser
>WENV180553769
OCJK01000070
16220
Bacteroidota
GGA
Ser
>WENV180553688
OCJK01000013
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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