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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180561492
OCKY01021222
196621
Bacillota
GTC
Asp
>WENV180561547
OCKY01063709
309417
Bacillota
GGC
Ala
>WENV180561499
OCKY01023893
235287
Bacillota
TTT
Lys
>WENV180561417
OCKY01005892
44854
Bacillota
TGA
Ser
>WENV180561542
OCKY01053154
44854
Bacillota
TGA
Ser
>WENV180561297
OCKY01000016
37071
Bacillota
TGA
Ser
>WENV180561304
OCKY01000022
37071
Bacillota
TGA
Ser
>WENV180561274
OCKY01000006
59312
Bacillota
CAG
Leu
>WENV180561466
OCKY01015851
238910
Bacillota
CTT
Lys
>WENV180561263
OCKY01000002
338147
Bacillota
CTC
Glu
>WENV180561276
OCKY01000007
338147
Bacillota
CTC
Glu
>WENV180561326
OCKY01000046
338147
Bacillota
CTC
Glu
>WENV180561530
OCKY01050104
235294
Bacillota
TGC
Ala
>WENV180561284
OCKY01000013
235114
Bacillota
TTT
Lys
>WENV180561332
OCKY01000047
235114
Bacillota
TTT
Lys
>WENV180561566
OCKY01090966
144668
Bacillota
GTC
Asp
>WENV180561353
OCKY01000159
429429
Bacillota
CCA
Trp
>WENV180561392
OCKY01002491
313454
Bacillota
GAA
Phe
>WENV180561425
OCKY01006626
41154
Bacillota
TAA
Leu
>WENV180561272
OCKY01000006
44859
Bacillota
AAG
Leu
>WENV180561273
OCKY01000006
44859
Bacillota
AAG
Leu
>WENV180561428
OCKY01007072
11034
Bacillota
GGA
Ser
>WENV180561491
OCKY01021222
235117
Bacillota
TAC
Val
>WENV180561498
OCKY01023893
235290
Bacillota
TTG
Gln
>WENV180561568
OCKY01091038
235079
Bacillota
GAA
Phe
>WENV180561402
OCKY01004599
338149
Bacillota
CTC
Glu
>WENV180561421
OCKY01005998
245298
Bacillota
CGG
Pro
>WENV180561346
OCKY01000106
37269
Bacillota
TGA
Ser
>WENV180561462
OCKY01013968
287000
Bacillota
GTT
Asn
>WENV180561391
OCKY01002491
169968
Bacillota
CAT
Met
>WENV180561456
OCKY01013514
152492
Bacillota
GGG
Pro
>WENV180561282
OCKY01000013
144610
Bacillota
GTG
His
>WENV180561420
OCKY01005998
411547
Bacillota
CTG
Gln
>WENV180561440
OCKY01011115
147684
Bacillota
ACG
Arg
>WENV180561418
OCKY01005892
4624
Bacillota
GCT
Ser
>WENV180561493
OCKY01021222
235095
Bacillota
GGT
Thr
>WENV180561523
OCKY01040099
411549
Bacillota
TTG
Gln
>WENV180561277
OCKY01000010
235142
Bacillota
CTT
Lys
>WENV180561316
OCKY01000031
235142
Bacillota
CTT
Lys
>WENV180561482
OCKY01018666
148188
Bacillota
CCG
Arg
>WENV180561455
OCKY01013093
235124
Bacillota
TGG
Pro
>WENV180561378
OCKY01001853
338129
Bacillota
TGT
Thr
>WENV180561386
OCKY01002283
144583
Bacillota
ACG
Arg
>WENV180561409
OCKY01005141
144652
Bacillota
GTC
Asp
>WENV180561543
OCKY01058082
247734
Bacillota
TGC
Ala
>WENV180561403
OCKY01004599
144621
Bacillota
GTT
Asn
>WENV180561298
OCKY01000016
235113
Bacillota
GAA
Phe
>WENV180561331
OCKY01000047
235113
Bacillota
GAA
Phe
>WENV180561400
OCKY01004451
58712
Bacillota
CAG
Leu
>WENV180561497
OCKY01023893
144762
Bacillota
TCT
Arg
>WENV180561528
OCKY01047198
245296
Bacillota
CCC
Gly
>WENV180561572
OCKY01091287
272992
Bacillota
CTT
Lys
>WENV180561556
OCKY01079769
344240
Bacillota
GCC
Gly
>WENV180561275
OCKY01000007
95563
Bacillota
GTA
Tyr
>WENV180561329
OCKY01000047
95563
Bacillota
GTA
Tyr
>WENV180561546
OCKY01062894
338131
Bacillota
GCC
Gly
>WENV180561550
OCKY01070072
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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