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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180570399
OCLS01000083
235097
Bacteroidota
TTT
Lys
>WENV180570417
OCLS01000096
235097
Bacteroidota
TTT
Lys
>WENV180570335
OCLS01000047
235102
Bacteroidota
CGT
Thr
>WENV180570661
OCLS01000358
415410
Bacteroidota
TTG
Gln
>WENV180570334
OCLS01000047
338124
Bacteroidota
CCG
Arg
>WENV180570815
OCLS01000657
338132
Bacteroidota
GCA
Cys
>WENV180570377
OCLS01000076
193809
Bacteroidota
CAT
Met
>WENV180570378
OCLS01000076
193809
Bacteroidota
CAT
Met
>WENV180570341
OCLS01000051
144656
Bacteroidota
GTG
His
>WENV180570549
OCLS01000240
235207
Bacteroidota
CAT
Met
>WENV180570263
OCLS01000025
80607
Bacteroidota
GTA
Tyr
>WENV180570724
OCLS01000444
80607
Bacteroidota
GTA
Tyr
>WENV180570655
OCLS01000355
113604
Bacteroidota
>WENV180570658
OCLS01000355
113604
Bacteroidota
>WENV180570262
OCLS01000025
52358
Bacteroidota
TGA
Ser
>WENV180570340
OCLS01000051
52358
Bacteroidota
TGA
Ser
>WENV180570721
OCLS01000444
144590
Bacteroidota
GTT
Asn
>WENV180570722
OCLS01000444
144590
Bacteroidota
GTT
Asn
>WENV180570731
OCLS01000462
95559
Bacteroidota
TAG
Leu
>WENV180570459
OCLS01000133
419272
Bacteroidota
CTG
Gln
>WENV180570326
OCLS01000045
144655
Bacteroidota
GGC
Ala
>WENV180570666
OCLS01000369
44852
Bacteroidota
TAA
Leu
>WENV180570461
OCLS01000133
132360
Bacteroidota
GGG
Pro
>WENV180570342
OCLS01000051
16224
Bacteroidota
GGA
Ser
>WENV180570460
OCLS01000133
16220
Bacteroidota
GGA
Ser
>WENV180570362
OCLS01000057
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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