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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180571572
OCLT01000194
145150
Campylobacterota
CCT
Arg
>WENV180571442
OCLT01000108
235308
Campylobacterota
TTT
Lys
>WENV180571635
OCLT01000260
44868
Campylobacterota
TGA
Ser
>WENV180571725
OCLT01000364
338464
Campylobacterota
TTG
Gln
>WENV180571624
OCLT01000250
182737
Campylobacterota
CAT
Met
>WENV180571726
OCLT01000364
145238
Campylobacterota
CAT
Met
>WENV180571633
OCLT01000260
58740
Campylobacterota
TAA
Leu
>WENV180571757
OCLT01000410
338218
Campylobacterota
GTT
Asn
>WENV180571737
OCLT01000376
145148
Campylobacterota
TCG
Arg
>WENV180571735
OCLT01000376
127217
Campylobacterota
TGG
Pro
>WENV180571446
OCLT01000108
235741
Campylobacterota
TTC
Glu
>WENV180571444
OCLT01000108
307596
Campylobacterota
TAC
Val
>WENV180571738
OCLT01000376
145149
Campylobacterota
TCT
Arg
>WENV180571648
OCLT01000273
338463
Campylobacterota
GGT
Thr
>WENV180571643
OCLT01000273
58794
Campylobacterota
GAG
Leu
>WENV180571447
OCLT01000108
10576
Campylobacterota
GCT
Ser
>WENV180571644
OCLT01000273
58795
Campylobacterota
CAA
Leu
>WENV180571443
OCLT01000108
338219
Campylobacterota
TTC
Glu
>WENV180571698
OCLT01000318
126674
Campylobacterota
CAT
Met
>WENV180571632
OCLT01000260
338216
Campylobacterota
GCC
Gly
>WENV180571656
OCLT01000281
95674
Campylobacterota
TAG
Leu
>WENV180571589
OCLT01000214
44915
Campylobacterota
GGA
Ser
>WENV180571736
OCLT01000376
145147
Campylobacterota
GTG
His
>WENV180571657
OCLT01000281
151969
Campylobacterota
GAT
Ile
>WENV180571441
OCLT01000108
269762
Campylobacterota
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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