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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180583335
OCNB01036404
312287
Gammaproteobacteria
TGT
Thr
>WENV180583087
OCNB01000152
236013
Gammaproteobacteria
TGC
Ala
>WENV180583208
OCNB01010844
236013
Gammaproteobacteria
TGC
Ala
>WENV180583181
OCNB01008562
149578
Gammaproteobacteria
ACG
Arg
>WENV180583044
OCNB01000007
236366
Gammaproteobacteria
GTG
His
>WENV180583669
OCNB01162371
276072
Gammaproteobacteria
>WENV180583048
OCNB01000019
276551
Gammaproteobacteria
GAA
Phe
>WENV180583287
OCNB01023141
301232
Gammaproteobacteria
TTC
Glu
>WENV180583801
OCNB01222439
245841
Gammaproteobacteria
GAA
Phe
>WENV180583117
OCNB01000539
95750
Gammaproteobacteria
TAG
Leu
>WENV180583096
OCNB01000211
185755
Gammaproteobacteria
GAT
Ile
>WENV180583491
OCNB01087288
311863
Gammaproteobacteria
GGC
Ala
>WENV180583045
OCNB01000008
237713
Gammaproteobacteria
TAC
Val
>WENV180583037
OCNB01000003
270352
Gammaproteobacteria
GCC
Gly
>WENV180583034
OCNB01000001
344326
Gammaproteobacteria
TTC
Glu
>WENV180583563
OCNB01120416
175414
Gammaproteobacteria
TCT
Arg
>WENV180583215
OCNB01011643
273942
Gammaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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