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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180585265
OCOL01000029
145317
Gammaproteobacteria
ACG
Arg
>WENV180585263
OCOL01000024
183605
Gammaproteobacteria
CCG
Arg
>WENV180585319
OCOL01000863
312287
Gammaproteobacteria
TGT
Thr
>WENV180585313
OCOL01000774
147647
Gammaproteobacteria
CAT
Met
>WENV180585337
OCOL01002294
154268
Gammaproteobacteria
ACG
Arg
>WENV180585304
OCOL01000602
245602
Gammaproteobacteria
TTT
Lys
>WENV180585393
OCOL01004171
148148
Gammaproteobacteria
GAC
Val
>WENV180585387
OCOL01004017
202944
Gammaproteobacteria
TGG
Pro
>WENV180585408
OCOL01005546
319098
Gammaproteobacteria
TAC
Val
>WENV180585295
OCOL01000320
236248
Gammaproteobacteria
TTT
Lys
>WENV180585664
OCOL01056186
128930
Gammaproteobacteria
GTC
Asp
>WENV180585535
OCOL01020049
247088
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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