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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180588783
OCOQ01000004
366531
Cyanobacteriota
TTG
Gln
>WENV180588797
OCOQ01000254
109616
Cyanobacteriota
GTA
Tyr
>WENV180588853
OCOQ01003229
144929
Cyanobacteriota
CAT
Met
>WENV180588790
OCOQ01000089
145761
Cyanobacteriota
GTC
Asp
>WENV180588793
OCOQ01000113
306125
Cyanobacteriota
GTG
His
>WENV180588813
OCOQ01000575
164907
Cyanobacteriota
GGG
Pro
>WENV180588785
OCOQ01000037
37357
Cyanobacteriota
TAA
Leu
>WENV180588922
OCOQ01022151
96363
Cyanobacteriota
TAG
Leu
>WENV180588788
OCOQ01000085
310428
Cyanobacteriota
TGC
Ala
>WENV180588792
OCOQ01000106
149253
Cyanobacteriota
ACG
Arg
>WENV180588836
OCOQ01001797
363933
Cyanobacteriota
GTT
Asn
>WENV180588832
OCOQ01001379
23971
Cyanobacteriota
TGA
Ser
>WENV180588784
OCOQ01000014
411836
Cyanobacteriota
TCC
Gly
>WENV180588815
OCOQ01000598
240100
Cyanobacteriota
CAT
Met
>WENV180588791
OCOQ01000094
95762
Cyanobacteriota
AAG
Leu
>WENV180588880
OCOQ01006061
188100
Cyanobacteriota
CCG
Arg
>WENV180588798
OCOQ01000254
341034
Cyanobacteriota
GGT
Thr
>WENV180588801
OCOQ01000348
145893
Cyanobacteriota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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