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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180594880
OCPA01032173
306609
Bacteroidota
GAA
Phe
>WENV180594837
OCPA01019592
172532
Bacteroidota
GTC
Asp
>WENV180594959
OCPA01061908
338625
Bacteroidota
TTC
Glu
>WENV180594709
OCPA01001594
364423
Bacteroidota
GGT
Thr
>WENV180594816
OCPA01014663
60695
Bacteroidota
GCT
Ser
>WENV180594728
OCPA01003185
127414
Bacteroidota
TGG
Pro
>WENV180594835
OCPA01019281
127414
Bacteroidota
TGG
Pro
>WENV180594907
OCPA01042297
235935
Bacteroidota
TCC
Gly
>WENV180594787
OCPA01009689
150454
Bacteroidota
TGT
Thr
>WENV180594729
OCPA01003185
145408
Bacteroidota
TCT
Arg
>WENV180594944
OCPA01052175
347866
Bacteroidota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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