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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180596912
OCPJ01004250
235449
Gammaproteobacteria
>WENV180596927
OCPJ01025681
144917
Gammaproteobacteria
>WENV180596929
OCPJ01030458
30640
Gammaproteobacteria
GGA
Ser
>WENV180596918
OCPJ01006600
235488
Gammaproteobacteria
TAC
Val
>WENV180596934
OCPJ01059934
80691
Gammaproteobacteria
CAG
Leu
>WENV180596932
OCPJ01050196
103203
Gammaproteobacteria
>WENV180596917
OCPJ01006600
339614
Gammaproteobacteria
TTT
Lys
>WENV180596904
OCPJ01000832
95725
Gammaproteobacteria
CAA
Leu
>WENV180596913
OCPJ01004250
190282
Gammaproteobacteria
CAT
Met
>WENV180596906
OCPJ01000887
189760
Gammaproteobacteria
TGG
Pro
>WENV180596925
OCPJ01021238
16250
Gammaproteobacteria
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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