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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180623706
OCQF01000517
147158
Actinomycetota
TTT
Lys
>WENV180623718
OCQF01000964
147155
Actinomycetota
GTC
Asp
>WENV180623700
OCQF01000346
237816
Actinomycetota
GGT
Thr
>WENV180623742
OCQF01003939
304559
Actinomycetota
GCC
Gly
>WENV180623705
OCQF01000513
37209
Actinomycetota
GAG
Leu
>WENV180623704
OCQF01000489
147157
Actinomycetota
TAC
Val
>WENV180623751
OCQF01005775
339641
Actinomycetota
GAC
Val
>WENV180623713
OCQF01000670
339640
Actinomycetota
CTG
Gln
>WENV180623698
OCQF01000325
289966
Actinomycetota
ACG
Arg
>WENV180623723
OCQF01001364
237815
Actinomycetota
CTT
Lys
>WENV180623721
OCQF01001057
237808
Actinomycetota
TGC
Ala
>WENV180623694
OCQF01000297
80899
Actinomycetota
CAG
Leu
>WENV180623719
OCQF01000964
147156
Actinomycetota
GAA
Phe
>WENV180623734
OCQF01001590
237804
Actinomycetota
TGT
Thr
>WENV180623701
OCQF01000346
338489
Actinomycetota
CAT
Met
>WENV180623733
OCQF01001566
237803
Actinomycetota
CGT
Thr
>WENV180623714
OCQF01000670
237812
Actinomycetota
CTC
Glu
>WENV180623689
OCQF01000217
45149
Actinomycetota
CGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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