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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180651686
OCSZ01290013
339412
Bacteroidota
GGT
Thr
>WENV180651668
OCSZ01278579
144657
Bacteroidota
CGG
Pro
>WENV180650800
OCSZ01016926
243025
Bacteroidota
CAT
Met
>WENV180650623
OCSZ01000290
339341
Bacteroidota
GGT
Thr
>WENV180651662
OCSZ01273441
17323
Bacteroidota
GGA
Ser
>WENV180650722
OCSZ01007409
338486
Bacteroidota
CAT
Met
>WENV180650694
OCSZ01004713
59689
Bacteroidota
CAG
Leu
>WENV180650678
OCSZ01003809
20893
Bacteroidota
GGA
Ser
>WENV180650656
OCSZ01002535
238121
Bacteroidota
CTT
Lys
>WENV180650657
OCSZ01002535
238121
Bacteroidota
CTT
Lys
>WENV180650652
OCSZ01002161
338132
Bacteroidota
GCA
Cys
>WENV180650658
OCSZ01002535
45423
Bacteroidota
TGA
Ser
>WENV180651683
OCSZ01289006
58714
Bacteroidota
CAA
Leu
>WENV180650617
OCSZ01000073
235165
Bacteroidota
CCA
Trp
>WENV180650663
OCSZ01002738
235165
Bacteroidota
CCA
Trp
>WENV180650699
OCSZ01004954
301449
Bacteroidota
CGG
Pro
>WENV180651785
OCSZ01366919
301449
Bacteroidota
CGG
Pro
>WENV180650713
OCSZ01006126
144656
Bacteroidota
GTG
His
>WENV180650631
OCSZ01000357
235207
Bacteroidota
CAT
Met
>WENV180650785
OCSZ01015594
143169
Bacteroidota
GGG
Pro
>WENV180651628
OCSZ01253871
144659
Bacteroidota
GTG
His
>WENV180650624
OCSZ01000290
235180
Bacteroidota
CCA
Trp
>WENV180650751
OCSZ01011649
80607
Bacteroidota
GTA
Tyr
>WENV180650869
OCSZ01033482
80607
Bacteroidota
GTA
Tyr
>WENV180651048
OCSZ01058417
80607
Bacteroidota
GTA
Tyr
>WENV180651475
OCSZ01166067
113604
Bacteroidota
>WENV180650622
OCSZ01000290
80614
Bacteroidota
>WENV180651760
OCSZ01305226
144590
Bacteroidota
GTT
Asn
>WENV180650956
OCSZ01047875
95559
Bacteroidota
TAG
Leu
>WENV180651346
OCSZ01121122
338164
Bacteroidota
TTC
Glu
>WENV180650674
OCSZ01003160
44852
Bacteroidota
TAA
Leu
>WENV180651616
OCSZ01244556
44852
Bacteroidota
TAA
Leu
>WENV180651379
OCSZ01133310
147439
Bacteroidota
TCT
Arg
>WENV180651763
OCSZ01305525
150485
Bacteroidota
GTT
Asn
>WENV180651666
OCSZ01275949
411550
Bacteroidota
CTG
Gln
>WENV180650742
OCSZ01010511
425638
Bacteroidota
CTG
Gln
>WENV180650711
OCSZ01005840
94703
Bacteroidota
GTA
Tyr
>WENV180651116
OCSZ01067138
94703
Bacteroidota
GTA
Tyr
>WENV180650612
OCSZ01000001
94703
Bacteroidota
GTA
Tyr
>WENV180651749
OCSZ01304720
185921
Bacteroidota
GTC
Asp
>WENV180651759
OCSZ01305191
347866
Bacteroidota
TTC
Glu
>WENV180651195
OCSZ01083074
146530
Bacteroidota
TGT
Thr
>WENV180651260
OCSZ01098516
23696
Bacteroidota
GCT
Ser
>WENV180651708
OCSZ01297869
56823
Bacteroidota
TGA
Ser
>WENV180650643
OCSZ01001356
16224
Bacteroidota
GGA
Ser
>WENV180650681
OCSZ01003935
16220
Bacteroidota
GGA
Ser
>WENV180650732
OCSZ01009771
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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